Co-expression analysis

Gene ID	Ta.14126.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At1g15270: - (HF=5e-4)
Module size	10 genes
NF	0.83
%ile	98.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.60	81.0	0.99	Ta.14126.1.S1_at	BE429982	-	-	5e-4	At1g15270	-	O.I.	H.G.	S.X.	Please select
0.95	99.1	0.99	Ta.1078.2.S1_a_at	BJ252383	Cyclophilin	-	8e-6	At4g38740	ROC1 (ROTAMASE CYP 1)	O.I.	H.G.	S.X.	Please select
0.90	94.8	0.99	Ta.2502.1.S1_a_at	BJ241868	HSP80-2	-	0	At5g56000	heat shock protein 81-4 (HSP81-4)	O.I.	H.G.	S.X.	Please select
0.90	94.8	0.99	Ta.5057.3.A1_at	CK194001	Profilin /// Profilin	-	2e-12	At4g29350	PFN2 (PROFILIN 2)	O.I.	H.G.	S.X.	Please select
0.89	94.6	0.99	Ta.28783.1.S1_x_at	U32310.1	single-stranded nucleic acid binding protein	-	5e-4	At4g39260	GR-RBP8	O.I.	H.G.	S.X.	Please select
0.80	92.2	0.99	Ta.27101.10.S1_x_at	AJ613323	-	-	1e-26	At5g10980	histone H3	O.I.	H.G.	S.X.	Please select
0.78	91.1	0.99	Ta.1342.1.S1_s_at	CD933741	-	-	6e-9	At2g23090	unknown protein	O.I.	H.G.	S.X.	Please select
0.75	89.8	0.99	Ta.1058.2.S1_x_at	BJ254771	S-adenosylmethionine decarboxylase precursor	-	3e-5	At3g02470	SAMDC (S-ADENOSYLMETHIONINE DECARBOXYLASE)	O.I.	H.G.	S.X.	Please select
0.75	89.8	0.99	Ta.1058.2.S1_at	BJ254771	S-adenosylmethionine decarboxylase precursor	-	3e-5	At3g02470	SAMDC (S-ADENOSYLMETHIONINE DECARBOXYLASE)	O.I.	H.G.	S.X.	Please select
0.73	89.1	0.99	Ta.24977.1.S1_x_at	CK205284	-	-	5e-67	At3g04120	GAPC1 (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE C SUBUNIT 1)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
27.8	99.8	GSM315203	target strand labeled: Antisense - rep1	GSE12528	Wheat "Chinese Spring" natural antisense transcription survey
6.3	98.2	GSM298069	Leaf tissue of Paragon at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
4.3	96.7	GSM314256	tissue type: germinating seed, root - rep3	GSE12508	Transcription patterns during wheat development
4.2	96.6	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
3.8	96.0	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.6	95.6	GSM314258	tissue type: germinating seed, embryo - rep2	GSE12508	Transcription patterns during wheat development
3.6	95.6	GSM314254	tissue type: germinating seed, root - rep1	GSE12508	Transcription patterns during wheat development
3.5	95.4	GSM298081	Leaf tissue of Solstice at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
3.3	95.0	GSM314259	tissue type: germinating seed, embryo - rep3	GSE12508	Transcription patterns during wheat development
3.1	94.5	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

Back to the CoP portal site

Back to the KAGIANA project homepage