Co-expression analysis

Gene ID	Ta.13966.3.S1_a_at
Gene name
Homology with Arabidopsis	Similar to At3g15670: late embryogenesis abundant protein, putative / LEA protein, putative (HF=1e+0)
Module size	6 genes
NF	0.38
%ile	61.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.2	0.95	Ta.13966.3.S1_a_at	CA639168	-	-	1e+0	At3g15670	late embryogenesis abundant protein, putative / LEA protein, putative	O.I.	H.G.	S.X.	Please select
0.44	64.5	0.95	Ta.1679.2.S1_at	CA638315	-	-	4e+0	At1g20690	-	O.I.	H.G.	S.X.	Please select
0.33	46.9	0.97	Ta.1806.1.S1_a_at	BE445559	-	-	9e-11	At4g32760	protein transporter	O.I.	H.G.	S.X.	Please select
0.27	35.6	0.95	Ta.6516.1.S1_at	CD888604	-	-	1e-2	At5g59210	myosin heavy chain-related	O.I.	H.G.	S.X.	Please select
0.27	35.6	0.95	Ta.13966.1.S1_at	CA606157	-	-	7e-1	At1g28550	AtRABA1i (Arabidopsis Rab GTPase homolog A1i)	O.I.	H.G.	S.X.	Please select
0.19	22.4	0.96	Ta.1806.1.S1_at	BE445559	-	-	9e-11	At4g32760	protein transporter	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
29.3	99.8	GSM298078	Leaf tissue of Solstice at 3 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
29.0	99.8	GSM298077	Leaf tissue of Solstice at 3 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
14.8	99.5	GSM314256	tissue type: germinating seed, root - rep3	GSE12508	Transcription patterns during wheat development
10.3	99.2	GSM314254	tissue type: germinating seed, root - rep1	GSE12508	Transcription patterns during wheat development
9.4	99.1	GSM314255	tissue type: germinating seed, root - rep2	GSE12508	Transcription patterns during wheat development
7.1	98.5	GSM314278	tissue type: anthers, before anthesis - rep1	GSE12508	Transcription patterns during wheat development
6.9	98.4	GSM314261	tissue type: seedling, root - rep2	GSE12508	Transcription patterns during wheat development
6.3	98.2	GSM314280	tissue type: anthers, before anthesis - rep3	GSE12508	Transcription patterns during wheat development
5.7	97.9	GSM314279	tissue type: anthers, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
5.5	97.8	GSM139932	Anther mature anthers rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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