Co-expression analysis

Gene ID Ta.1391.2.S1_at
Gene name
Homology with ArabidopsisSimilar to At2g24090: ribosomal protein L35 family protein (HF=9e-11)
Module size 12 genes
NF 0.43
%ile 68.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8894.40.86Ta.1391.2.S1_atCK211679--9e-11At2g24090ribosomal protein L35 family proteinO.I.H.G.S.X.
0.8192.40.86Ta.6578.3.A1_atBJ308193--1e+0At2g31200ADF6 (ACTIN DEPOLYMERIZING FACTOR 6)O.I.H.G.S.X.
0.6786.30.87Ta.578.1.S1_atBE489213--9e-1At3g48185unknown proteinO.I.H.G.S.X.
0.5374.90.89Ta.17974.1.A1_atCA623388--4e-11At1g56045ribosomal protein L41 family proteinO.I.H.G.S.X.
0.5273.70.86TaAffx.29059.1.S1_x_atCA651336--1e+0At1g61520LHCA3O.I.H.G.S.X.
0.3651.90.86TaAffx.131855.1.S1_atCA695496--6e+0At3g01516unknown proteinO.I.H.G.S.X.
0.3244.40.92TaAffx.86236.1.S1_atCA613373--3e-1At2g22260oxidoreductase, 2OG-Fe(II) oxygenase family proteinO.I.H.G.S.X.
0.3142.70.91Ta.1391.2.S1_x_atCK211679--9e-11At2g24090ribosomal protein L35 family proteinO.I.H.G.S.X.
0.2939.20.92Ta.834.3.S1_x_atBQ608659--1e+0At5g05000TOC34 (TRANSLOCON AT THE OUTER ENVELOPE MEMBRANE OF CHLOROPLASTS 34)O.I.H.G.S.X.
0.2735.60.93TaAffx.83374.1.S1_atCA658276--2e-1At5g35620LSP1 (LOSS OF SUSCEPTIBILITY TO POTYVIRUS 1)O.I.H.G.S.X.
0.2125.50.91TaAffx.78900.2.S1_s_atCA725224--1e+1At5g17073unknown proteinO.I.H.G.S.X.
0.2024.00.91TaAffx.117130.1.S1_atBQ609707--3e-1At5g21910unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
11.799.3GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
11.099.3GSM250895Tc_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
10.299.2GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
9.999.1GSM314276tissue type: pistil, before anthesis - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
8.999.0GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
8.098.8GSM314256tissue type: germinating seed, root - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
7.598.6GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
6.998.4GSM314275tissue type: pistil, before anthesis - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
6.898.4GSM250896Tc_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
6.498.2GSM314277tissue type: pistil, before anthesis - rep3GSE12508Transcription patterns during wheat developmentLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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