Co-expression analysis

Gene ID Ta.13897.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g57440: GS1 (HF=1e+0)
Module size 15 genes
NF 0.55
%ile 81.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7389.10.90Ta.13897.1.S1_atBQ743308--1e+0At5g57440GS1O.I.H.G.S.X.
0.8292.70.93Ta.20986.1.S1_x_atCA641147--4e+0At2g05440glycine-rich proteinO.I.H.G.S.X.
0.7389.10.91Ta.13937.1.A1_atBQ744333--5e+0At1g26480GRF12 (GENERAL REGULATORY FACTOR 12)O.I.H.G.S.X.
0.6986.90.91Ta.14311.1.A1_atBU099716--1e-3At2g41660MIZ1 (mizu-kussei 1)O.I.H.G.S.X.
0.6986.90.92Ta.1708.1.A1_atBE445919--3e-1At5g50430UBC33 (ubiquitin-conjugating enzyme 33)O.I.H.G.S.X.
0.6483.60.94TaAffx.110993.1.A1_atBJ284006--1e+0At5g26740unknown proteinO.I.H.G.S.X.
0.5678.60.94Ta.19141.1.S1_atCA647806--1e-1At5g24120SIGE (SIGMA FACTOR E)O.I.H.G.S.X.
0.5173.00.92TaAffx.56637.1.S1_atCK215319--6e+0At3g50260CEJ1 (COOPERATIVELY REGULATED BY ETHYLENE AND JASMONATE 1)O.I.H.G.S.X.
0.5072.40.92Ta.18721.1.S1_atCA641200--9e-1At3g46080zinc finger (C2H2 type) family proteinO.I.H.G.S.X.
0.4767.90.91TaAffx.64631.1.A1_atBJ284527--5e+0At5g24655LSU4 (RESPONSE TO LOW SULFUR 4)O.I.H.G.S.X.
0.4464.50.91Ta.19244.1.S1_a_atCA649219--1e+0At3g59960ASHH4 (HISTONE-LYSINE N-METHYLTRANSFERASE ASHH4)O.I.H.G.S.X.
0.4464.50.92TaAffx.113389.1.S1_x_atCA609333--2e+1At5g05657-O.I.H.G.S.X.
0.3956.10.93TaAffx.119224.1.A1_x_atBJ282325--1e+0At4g11290peroxidase, putativeO.I.H.G.S.X.
0.3854.70.94TaAffx.119224.1.A1_atBJ282325--1e+0At4g11290peroxidase, putativeO.I.H.G.S.X.
0.3346.90.93TaAffx.92982.1.S1_atBJ237552--3e-1At2g16130mannitol transporter, putativeO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
17.699.7GSM314261tissue type: seedling, root - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
15.399.6GSM314262tissue type: seedling, root - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
14.499.5GSM324488Si- B+ rep2GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
6.898.4GSM314260tissue type: seedling, root - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
6.798.4GSM314254tissue type: germinating seed, root - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
6.498.2GSM324487Si- B+ rep1GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
5.797.9GSM314256tissue type: germinating seed, root - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
5.297.5GSM314284tissue type: 22 DAP embryo - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
4.897.2GSM314255tissue type: germinating seed, root - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
4.697.0GSM314285tissue type: 22 DAP embryo - rep2GSE12508Transcription patterns during wheat developmentLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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