Co-expression analysis

Gene ID	Ta.13851.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At2g03120: ATSPP (ARABIDOPSIS SIGNAL PEPTIDE PEPTIDASE) (HF=7e-23)
Module size	6 genes
NF	0.44
%ile	69.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.2	0.98	Ta.13851.1.S1_at	CK170778	-	-	7e-23	At2g03120	ATSPP (ARABIDOPSIS SIGNAL PEPTIDE PEPTIDASE)	O.I.	H.G.	S.X.	Please select
0.77	90.8	0.98	Ta.21586.1.S1_x_at	CA734606	-	-	3e+1	At5g14320	30S ribosomal protein S13, chloroplast (CS13)	O.I.	H.G.	S.X.	Please select
0.67	86.3	0.98	Ta.21586.1.S1_at	CA734606	-	-	3e+1	At5g14320	30S ribosomal protein S13, chloroplast (CS13)	O.I.	H.G.	S.X.	Please select
0.47	67.9	0.98	Ta.9054.1.S1_a_at	CK199161	-	-	1e-11	At2g25910	3'-5' exonuclease domain-containing protein / K homology domain-containing protein / KH domain-containing protein	O.I.	H.G.	S.X.	Please select
0.24	30.3	0.98	Ta.7585.1.S1_at	CK206711	-	-	3e-9	At1g72710	CKL2 (CASEIN KINASE 1-LIKE PROTEIN 2)	O.I.	H.G.	S.X.	Please select
0.20	24.0	0.98	Ta.9607.1.A1_a_at	CA708572	-	-	5e+0	At5g24510	60s acidic ribosomal protein P1, putative	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
5.2	97.5	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.2	96.6	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
3.6	95.6	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.4	95.2	GSM250899	TcLr34_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.2	94.8	GSM250897	TcLr1_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.2	94.8	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
3.2	94.8	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
3.0	94.3	GSM138193	genotype B33 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.0	94.3	GSM314270	tissue type: immature inflorescence - rep2	GSE12508	Transcription patterns during wheat development
2.8	93.6	GSM314269	tissue type: immature inflorescence - rep1	GSE12508	Transcription patterns during wheat development

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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