Co-expression analysis

Gene ID Ta.13841.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At3g14680: CYP72A14 (HF=6e-5)
Module size 6 genes
NF 0.38
%ile 60.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5374.90.95Ta.13841.1.S1_atAJ440511--6e-5At3g14680CYP72A14O.I.H.G.S.X.
0.5576.80.96Ta.8859.1.S1_atBQ162524--2e-1At4g39950CYP79B2O.I.H.G.S.X.
0.5072.40.96TaAffx.59343.1.S1_atCA602787--4e+0At2g23840HNH endonuclease domain-containing proteinO.I.H.G.S.X.
0.3651.90.96Ta.25113.1.S1_atCA603697--1e+1At3g12880invertase/pectin methylesterase inhibitor family proteinO.I.H.G.S.X.
0.2532.10.96Ta.5322.1.S1_atBJ285768--9e-3At1g80120unknown proteinO.I.H.G.S.X.
0.2329.00.96TaAffx.3210.1.S1_atBQ236874--4e-2At3g07700ABC1 family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.598.3GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.596.9GSM111233genotype H8 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological repsLink to GEO
4.096.3GSM138210genotype B65 developing seed at 5 days after anthesis, biological rep1GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB locationLink to GEO
3.795.8GSM138154genotype H5 developing seed at 5 days after anthesis, biological rep1GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB locationLink to GEO
3.595.4GSM314261tissue type: seedling, root - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
3.094.3GSM138177genotype A40 developing seed at 5 days after anthesis, biological rep3GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB locationLink to GEO
2.994.0GSM138162genotype E5 developing seed at 5 days after anthesis, biological rep1GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB locationLink to GEO
2.893.6GSM143506Thatcher_Lr34 (resistant), rust inoculated distal leaf, replication 2GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halvesLink to GEO
2.793.3GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
2.692.9GSM314273tissue type: floral bracts, before anthesis - rep2GSE12508Transcription patterns during wheat developmentLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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