Co-expression analysis

Gene ID	Ta.1382.1.S1_x_at
Gene name
Homology with Arabidopsis	Similar to At1g64650: - (HF=8e-23)
Module size	7 genes
NF	0.42
%ile	66.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.41	59.6	0.95	Ta.1382.1.S1_x_at	BQ237866	-	-	8e-23	At1g64650	-	O.I.	H.G.	S.X.	Please select
0.44	64.5	0.98	Ta.28368.2.S1_at	CB307729	Type 1 non specific lipid transfer protein precursor	-	2e+0	At4g22250	zinc finger (C3HC4-type RING finger) family protein	O.I.	H.G.	S.X.	Please select
0.43	62.2	0.96	Ta.1227.1.A1_at	BQ160869	-	-	2e+1	At1g47780	acyl-protein thioesterase-related	O.I.	H.G.	S.X.	Please select
0.40	58.4	0.96	Ta.28368.1.S1_x_at	CK206492	Type 1 non-specific lipid transfer protein precursor	-	8e+0	At5g63087	-	O.I.	H.G.	S.X.	Please select
0.40	58.4	0.97	Ta.3199.1.S1_a_at	BJ207484	-	-	5e+0	At5g21940	unknown protein	O.I.	H.G.	S.X.	Please select
0.36	51.9	0.97	Ta.6416.1.S1_at	CK154083	-	-	5e-15	At2g38110	GPAT6 (GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 6)	O.I.	H.G.	S.X.	Please select
0.32	44.4	0.97	Ta.12753.1.S1_at	CD926424	-	-	5e+0	At1g18130	tRNA synthetase-related / tRNA ligase-related	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
7.2	98.5	GSM298081	Leaf tissue of Solstice at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
5.3	97.6	GSM298082	Leaf tissue of Solstice at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
4.6	97.0	GSM139914	Anther pre-meiosis rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.8	96.0	GSM139929	Anther immature pollen rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.2	94.8	GSM139920	Anther diplotene-anaphaseI rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.2	94.8	GSM298057	Leaf tissue of Harnesk at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
3.1	94.5	GSM143521	Thatcher_Lr34 (susceptible), mock inoculated basal leaf, replication 1	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
3.1	94.5	GSM139917	Anther leptotene-pachytene rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.8	93.6	GSM139916	Anther leptotene-pachytene rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.8	93.6	GSM139921	Anther diplotene-anaphaseI rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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