Co-expression analysis

Gene ID Ta.13721.2.S1_x_at
Gene name
Homology with ArabidopsisSimilar to At5g42630: ATS (ABERRANT TESTA SHAPE) (HF=1e+1)
Module size 6 genes
NF 0.45
%ile 70.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7389.10.98Ta.13721.2.S1_x_atCA708836--1e+1At5g42630ATS (ABERRANT TESTA SHAPE)O.I.H.G.S.X.
0.5072.40.98Ta.3990.1.S1_atBJ262866--2e-5At1g67930Golgi transport complex protein-relatedO.I.H.G.S.X.
0.5072.40.98Ta.13721.1.S1_s_atCK198418--7e-7At3g22845emp24/gp25L/p24 protein-relatedO.I.H.G.S.X.
0.5072.40.99Ta.13721.1.S1_x_atCK198418--7e-7At3g22845emp24/gp25L/p24 protein-relatedO.I.H.G.S.X.
0.3346.90.98Ta.21119.1.S1_a_atCD915118--3e-3At3g63000NPL41 (NPL4-LIKE PROTEIN 1)O.I.H.G.S.X.
0.2329.00.98Ta.1770.1.S1_a_atCK209608--6e-1At4g32930unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.397.6GSM314261tissue type: seedling, root - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
5.097.4GSM314258tissue type: germinating seed, embryo - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
4.797.1GSM314260tissue type: seedling, root - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
3.495.2GSM314259tissue type: germinating seed, embryo - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
2.893.6GSM138207genotype B11 developing seed at 5 days after anthesis, biological rep3GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB locationLink to GEO
2.692.9GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
2.692.9GSM314256tissue type: germinating seed, root - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
2.592.5GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
2.592.5GSM138205genotype H8 developing seed at 5 days after anthesis, biological rep3GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB locationLink to GEO
2.391.5GSM138159genotype F36 developing seed at 5 days after anthesis, biological rep3GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB locationLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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