Co-expression analysis

Gene ID	Ta.13701.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At1g06680: PSBP-1 (PHOTOSYSTEM II SUBUNIT P-1) (HF=8e+0)
Module size	6 genes
NF	0.16
%ile	30.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.50	72.4	0.88	Ta.13701.1.S1_at	BQ280458	-	-	8e+0	At1g06680	PSBP-1 (PHOTOSYSTEM II SUBUNIT P-1)	O.I.	H.G.	S.X.	Please select
0.42	60.9	0.88	TaAffx.7696.1.S1_at	CA652956	-	-	1e+0	At3g27360	histone H3	O.I.	H.G.	S.X.	Please select
0.17	19.8	0.89	Ta.23059.2.S1_x_at	BJ233581	-	-	2e+1	At5g44570	unknown protein	O.I.	H.G.	S.X.	Please select
0.12	13.3	0.89	Ta.7482.1.S1_at	CD871466	-	-	3e-3	At3g15260	protein phosphatase 2C, putative / PP2C, putative	O.I.	H.G.	S.X.	Please select
0.11	12.4	0.88	Ta.30253.1.A1_at	BG906702	-	-	1e+1	At5g04340	ZAT6 (ZINC FINGER OF ARABIDOPSIS THALIANA 6)	O.I.	H.G.	S.X.	Please select
0.06	7.6	0.89	TaAffx.116106.1.S1_at	BE429815	-	-	6e+0	At1g44920	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
6.6	98.3	GSM250914	Tc_7dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.5	96.9	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
4.2	96.6	GSM314269	tissue type: immature inflorescence - rep1	GSE12508	Transcription patterns during wheat development
4.1	96.4	GSM314270	tissue type: immature inflorescence - rep2	GSE12508	Transcription patterns during wheat development
3.8	96.0	GSM298073	Crown tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
3.7	95.8	GSM315203	target strand labeled: Antisense - rep1	GSE12528	Wheat "Chinese Spring" natural antisense transcription survey
3.7	95.8	GSM138162	genotype E5 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.7	95.8	GSM250902	Tc_7dpi_inoculated_rep1	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.6	95.6	GSM246397	SB57_Stem_ rep2_at anthesis	GSE9767	Genotypic differences in water soluble carbohydrate metabolism in stem
3.5	95.4	GSM250908	Tc_7dpi_inoculated_rep2	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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