Co-expression analysis

Gene ID Ta.1341.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At1g33820: unknown protein (HF=4e+0)
Module size 32 genes
NF 0.36
%ile 58.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8393.40.89Ta.1341.1.S1_atBE425554--4e+0At1g33820unknown proteinO.I.H.G.S.X.
0.4969.70.92Ta.10303.1.S1_atBJ316273--6e-1At4g03960tyrosine specific protein phosphatase family proteinO.I.H.G.S.X.
0.4767.90.91TaAffx.98376.1.S1_atBE493612--3e+0At5g25010unknown proteinO.I.H.G.S.X.
0.4666.80.90Ta.10690.3.S1_a_atCA609445--2e-1At1g72880acid phosphatase survival protein SurE, putativeO.I.H.G.S.X.
0.4464.50.94Ta.4540.1.A1_atBJ267757--5e+0At5g26667PYR6O.I.H.G.S.X.
0.4464.50.91Ta.11765.1.A1_a_atBJ249640--2e+0At5g47870unknown proteinO.I.H.G.S.X.
0.4362.20.92Ta.24619.2.S1_atCA596037--1e+0At5g36080unknown proteinO.I.H.G.S.X.
0.4260.90.93Ta.10213.2.S1_a_atCA610492--2e-8At1g16300GAPCP-2O.I.H.G.S.X.
0.4159.60.91TaAffx.131026.1.A1_atBE517262--3e-1At1g63057unknown proteinO.I.H.G.S.X.
0.4159.60.94Ta.28332.1.S1_atCD899227probable kinase associated protein phosphatase-2e-3At5g19280KAPP (KINASE ASSOCIATED PROTEIN PHOSPHATASE)O.I.H.G.S.X.
0.4058.40.92Ta.9625.1.S1_x_atBJ236772--2e-2At2g03110RNA binding / nucleic acid bindingO.I.H.G.S.X.
0.4058.40.94Ta.3084.1.S1_atBQ166296vesicle-associated membrane protein-associated protein-6e-1At4g00170vesicle-associated membrane family protein / VAMP family proteinO.I.H.G.S.X.
0.4058.40.94Ta.1253.1.S1_a_atCK200118--1e+1At5g63085-O.I.H.G.S.X.
0.3854.70.94Ta.10213.1.S1_atBJ249947--1e-49At1g16300GAPCP-2O.I.H.G.S.X.
0.3854.70.92TaAffx.12581.1.A1_atBJ252717--3e-1At1g05300ZIP5O.I.H.G.S.X.
0.3854.70.92Ta.19555.1.S1_atCA653351--2e-22At1g80230cytochrome c oxidase family proteinO.I.H.G.S.X.
0.3854.70.92Ta.10988.1.A1_atBQ167026--5e-1At1g66070translation initiation factor-relatedO.I.H.G.S.X.
0.3854.70.94Ta.22867.1.S1_atCK208259--2e-11At5g57815cytochrome c oxidase subunit 6b, putativeO.I.H.G.S.X.
0.3753.00.90TaAffx.11941.2.S1_atBJ305037--4e+0At3g14880-O.I.H.G.S.X.
0.3753.00.95Ta.8352.1.S1_atBQ161778--2e+0At5g02280synbindin, putativeO.I.H.G.S.X.
0.3651.90.91TaAffx.123433.1.S1_atCA650258--5e+0At4g21610LOL2 (LSD ONE LIKE 2)O.I.H.G.S.X.
0.3549.80.93Ta.9625.1.S1_atBJ236772--2e-2At2g03110RNA binding / nucleic acid bindingO.I.H.G.S.X.
0.3346.90.93Ta.9737.2.S1_x_atCK212278--1e-33At4g35260IDH1 (ISOCITRATE DEHYDROGENASE 1)O.I.H.G.S.X.
0.3346.90.94Ta.9161.1.S1_atBJ256091--2e+0At3g22070proline-rich family proteinO.I.H.G.S.X.
0.3244.40.92TaAffx.133237.1.S1_x_atBJ228645--1e+0At4g25410DNA binding / transcription factorO.I.H.G.S.X.
0.2939.20.93Ta.25594.1.S1_atBJ262129--2e-5At1g25280AtTLP10 (TUBBY LIKE PROTEIN 10)O.I.H.G.S.X.
0.2939.20.94Ta.3426.1.S1_atBM137013--9e+0At5g14510armadillo/beta-catenin repeat family proteinO.I.H.G.S.X.
0.2839.20.92Ta.3912.1.S1_atCD871615BHLH transcription factor-2e-7At4g16430basic helix-loop-helix (bHLH) family proteinO.I.H.G.S.X.
0.2839.20.89TaAffx.106257.1.S1_atBE493730--4e-8At4g21060galactosyltransferase family proteinO.I.H.G.S.X.
0.2735.60.92TaAffx.133237.1.S1_atBJ228645--1e+0At4g25410DNA binding / transcription factorO.I.H.G.S.X.
0.2329.00.95TaAffx.133237.2.S1_atBJ309502--1e+0At4g01220-O.I.H.G.S.X.
0.1618.20.92Ta.4648.2.S1_atCD905696--3e-1At1g72690unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
11.999.4GSM314280tissue type: anthers, before anthesis - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
11.099.3GSM314279tissue type: anthers, before anthesis - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
9.599.1GSM314278tissue type: anthers, before anthesis - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
8.298.8GSM139931Anther maturea nthers rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
8.298.8GSM139932Anther mature anthers rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
7.398.6GSM139933Anther mature anthers rep3GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
3.795.8GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.094.3GSM139927Anther tetrads rep3GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
2.692.9GSM314251tissue type: germinating seed, coleoptile - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
2.692.9GSM139925Anther tetrads rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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