Co-expression analysis

Gene ID	Ta.13250.2.S1_x_at
Gene name
Homology with Arabidopsis	Similar to At5g20720: CPN20 (CHAPERONIN 20) (HF=7e-4)
Module size	8 genes
NF	0.68
%ile	91.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.37	53.0	0.96	Ta.13250.2.S1_x_at	CK158867	-	-	7e-4	At5g20720	CPN20 (CHAPERONIN 20)	O.I.	H.G.	S.X.	Please select
0.93	98.7	0.98	Ta.1381.2.S1_x_at	BQ172233	-	-	2e+0	At3g07480	electron carrier/ iron-sulfur cluster binding	O.I.	H.G.	S.X.	Please select
0.86	94.1	0.98	Ta.1381.2.S1_at	BQ172233	-	-	2e+0	At3g07480	electron carrier/ iron-sulfur cluster binding	O.I.	H.G.	S.X.	Please select
0.75	89.8	0.98	Ta.1452.1.S1_at	CA601014	-	-	4e-4	At1g48350	ribosomal protein L18 family protein	O.I.	H.G.	S.X.	Please select
0.71	88.0	0.98	Ta.621.2.S1_x_at	CK211230	-	-	8e+0	At1g74970	RPS9 (RIBOSOMAL PROTEIN S9)	O.I.	H.G.	S.X.	Please select
0.67	86.3	0.98	Ta.3100.2.S1_x_at	CA619410	-	-	1e-3	At2g43030	ribosomal protein L3 family protein	O.I.	H.G.	S.X.	Please select
0.67	86.3	0.98	Ta.3100.1.S1_x_at	CK196277	-	-	1e-1	At2g43030	ribosomal protein L3 family protein	O.I.	H.G.	S.X.	Please select
0.63	83.1	0.97	Ta.1452.1.S1_x_at	CA601014	-	-	4e-4	At1g48350	ribosomal protein L18 family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
11.0	99.3	GSM343685	Wheat var. Kennedy_control_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
10.3	99.2	GSM343687	Wheat var. Kennedy_Fp inoculated_rep2	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
9.9	99.1	GSM343682	Wheat var. Kennedy_control_rep2	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
9.7	99.1	GSM343686	Wheat var. Kennedy_Fp inoculated_rep1	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
9.6	99.1	GSM343678	Wheat var. Kennedy_control_rep1	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
9.6	99.1	GSM343688	Wheat var. Kennedy_Fp inoculated_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
6.8	98.4	GSM314266	tissue type: seedling, leaf - rep1	GSE12508	Transcription patterns during wheat development
5.7	97.9	GSM250899	TcLr34_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.3	96.7	GSM250895	Tc_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.1	96.4	GSM250897	TcLr1_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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