Co-expression analysis

Gene ID	Ta.13084.2.S1_at
Gene name
Homology with Arabidopsis	Similar to At2g21060: ATGRP2B (GLYCINE-RICH PROTEIN 2B) (HF=3e+0)
Module size	6 genes
NF	0.46
%ile	71.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.50	72.4	0.96	Ta.13084.2.S1_at	BG904606	-	-	3e+0	At2g21060	ATGRP2B (GLYCINE-RICH PROTEIN 2B)	O.I.	H.G.	S.X.	Please select
0.60	81.0	0.97	Ta.13084.1.S1_at	CA744806	-	-	3e-1	At3g13437	unknown protein	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.97	TaAffx.5779.1.S1_at	BJ307256	-	-	1e-1	At1g35365	unknown protein	O.I.	H.G.	S.X.	Please select
0.40	58.4	0.96	Ta.10423.1.S1_x_at	BJ245813	-	-	1e+0	At5g63905	unknown protein	O.I.	H.G.	S.X.	Please select
0.33	46.9	0.96	Ta.19632.1.S1_at	BT009194.1	-	-	2e-1	At5g63060	transporter	O.I.	H.G.	S.X.	Please select
0.31	42.7	0.97	TaAffx.21100.1.S1_at	CD885592	-	-	1e-1	At4g02790	GTP-binding family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
29.6	99.8	GSM314262	tissue type: seedling, root - rep3	GSE12508	Transcription patterns during wheat development
27.8	99.8	GSM314261	tissue type: seedling, root - rep2	GSE12508	Transcription patterns during wheat development
8.9	99.0	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.9	98.0	GSM250899	TcLr34_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.4	97.7	GSM250897	TcLr1_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.8	97.2	GSM250895	Tc_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.7	97.1	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.4	96.8	GSM250896	Tc_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
2.5	92.5	GSM298072	Crown tissue of Paragon at 3 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
2.4	92.0	GSM314260	tissue type: seedling, root - rep1	GSE12508	Transcription patterns during wheat development

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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