Co-expression analysis

Gene ID Ta.12823.1.S1_at
Gene name Ammonium transporter Amt1;1
Homology with ArabidopsisSimilar to At4g13510: AMT1 (HF=2e-20)
Module size 6 genes
NF 0.76
%ile 95.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8092.20.96Ta.12823.1.S1_atCA638403Ammonium transporter Amt1;1-2e-20At4g13510AMT1O.I.H.G.S.X.
0.8393.40.97Ta.5484.1.A1_x_atCA671571--1e+0At4g19680IRT2O.I.H.G.S.X.
0.8092.20.97Ta.12823.1.S1_s_atCA638403--2e-20At4g13510AMT1O.I.H.G.S.X.
0.6182.00.95Ta.8830.2.S1_x_atCA647852--3e-1At1g06475unknown proteinO.I.H.G.S.X.
0.6081.00.97Ta.27156.1.S1_atBT009507.1--1e+0At4g36720HVA22K (HVA22-LIKE PROTEIN K)O.I.H.G.S.X.
0.4464.50.97Ta.8913.1.S1_s_atCD373694--1e+1At4g04745unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
41.499.9GSM314261tissue type: seedling, root - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
38.499.9GSM314262tissue type: seedling, root - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
25.399.8GSM314260tissue type: seedling, root - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
22.099.8GSM314255tissue type: germinating seed, root - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
17.299.6GSM314254tissue type: germinating seed, root - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
15.299.6GSM314256tissue type: germinating seed, root - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
11.399.3GSM139931Anther maturea nthers rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
11.299.3GSM139933Anther mature anthers rep3GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
9.499.1GSM139932Anther mature anthers rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
7.798.7GSM314278tissue type: anthers, before anthesis - rep1GSE12508Transcription patterns during wheat developmentLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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