Co-expression analysis

Gene ID Ta.12751.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g49820: emb1879 (embryo defective 1879) (HF=3e-10)
Module size 32 genes
NF 0.27
%ile 44.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9094.80.96Ta.12751.1.S1_atCK208020--3e-10At5g49820emb1879 (embryo defective 1879)O.I.H.G.S.X.
0.4362.20.97Ta.16834.1.S1_atBJ283123--7e-1At4g39390NST-K1 (NUCLEOTIDE SUGAR TRANSPORTER-KT 1)O.I.H.G.S.X.
0.4159.60.97Ta.2689.1.S1_atCD879309--1e-9At3g21140FMN bindingO.I.H.G.S.X.
0.3549.80.97Ta.6668.1.A1_atCA684110--2e-1At5g46730glycine-rich proteinO.I.H.G.S.X.
0.3244.40.97Ta.11481.1.A1_atBQ170184--4e-1At3g59800unknown proteinO.I.H.G.S.X.
0.3244.40.96Ta.13425.1.S1_atCK211578--2e-29At4g08790nitrilase, putativeO.I.H.G.S.X.
0.3040.90.97Ta.12565.1.S1_atCK205701--2e-3At4g24690ubiquitin-associated (UBA)/TS-N domain-containing protein / octicosapeptide/Phox/Bemp1 (PB1) domain-containing proteinO.I.H.G.S.X.
0.3040.90.97AFFX-Tae-r2-Bs-thr-5_s_atAFFX-Tae-r2-Bs-thr-5---O.I.H.G.S.X.
0.3040.90.97Ta.2514.1.S1_atBQ162494--1e+0At3g47860apolipoprotein D-relatedO.I.H.G.S.X.
0.2939.20.97Ta.14434.1.S1_atCK193800--6e-6At2g46500phosphatidylinositol 3- and 4-kinase family protein / ubiquitin family proteinO.I.H.G.S.X.
0.2839.20.97Ta.8384.1.S1_atBQ161820--2e+0At1g16530ASL9 (ASYMMETRIC LEAVES 2 LIKE 9)O.I.H.G.S.X.
0.2735.60.96Ta.20909.1.S1_atCK197667--2e-1At3g60530zinc finger (GATA type) family proteinO.I.H.G.S.X.
0.2735.60.97Ta.1323.1.S1_atCK201629--5e-4At5g10330HPA1 (HISTIDINOL PHOSPHATE AMINOTRANSFERASE 1)O.I.H.G.S.X.
0.2735.60.98Ta.13236.1.S1_atBM136267SUSIBA2-like protein-2e-18At4g26640WRKY20O.I.H.G.S.X.
0.2735.60.96Ta.11198.1.S1_atBQ169601--3e+0At2g26520unknown proteinO.I.H.G.S.X.
0.2633.60.97Ta.21959.1.S1_atBJ322991--7e-23At4g31750WIN2 (HOPW1-1-INTERACTING 2)O.I.H.G.S.X.
0.2633.60.97TaAffx.128493.1.A1_s_atCK170442Folylpolyglutamate synthetase-1e+1At5g05980ATDFB (A. THALIANA DHFS-FPGS HOMOLOG B)O.I.H.G.S.X.
0.2532.10.97Ta.4993.1.A1_atBQ168542--3e+0At1g49950DNA-binding protein, putativeO.I.H.G.S.X.
0.2430.30.96Ta.906.1.S1_atCK195658--3e-22At1g16180TMS membrane family protein / tumour differentially expressed (TDE) family proteinO.I.H.G.S.X.
0.2430.30.98Ta.22731.1.S1_a_atBJ276668--9e-9At5g55510P-P-bond-hydrolysis-driven protein transmembrane transporter/ protein transporterO.I.H.G.S.X.
0.2329.00.97Ta.14524.1.S1_atCK193637--6e-1At3g26790FUS3 (FUSCA 3)O.I.H.G.S.X.
0.2329.00.97Ta.547.1.S1_atAY364467.1--2e-5At3g24170ATGR1 (glutathione-disulfide reductase)O.I.H.G.S.X.
0.2227.10.97Ta.2438.1.S1_atCD903064--1e+0At1g29830unknown proteinO.I.H.G.S.X.
0.2227.10.97Ta.2593.2.S1_atBQ169061--1e-25At5g62000ARF2 (AUXIN RESPONSE FACTOR 2)O.I.H.G.S.X.
0.2125.50.96Ta.28253.1.S1_atBJ250223--0At5g09810ACT7 (ACTIN 7)O.I.H.G.S.X.
0.2024.00.97Ta.30056.1.S1_atCD903551--4e-18At3g55320PGP20 (P-GLYCOPROTEIN 20)O.I.H.G.S.X.
0.2024.00.97Ta.14582.1.S1_atCK209915--1e-9At5g53850haloacid dehalogenase-like hydrolase family proteinO.I.H.G.S.X.
0.2024.00.98Ta.7168.1.S1_atCK167675--1e-65At4g30600signal recognition particle receptor alpha subunit family proteinO.I.H.G.S.X.
0.1922.40.97Ta.5057.3.A1_atCK194001Profilin /// Profilin-2e-12At4g29350PFN2 (PROFILIN 2)O.I.H.G.S.X.
0.1922.40.98Ta.1198.1.S1_atBJ272933--1e-8At5g59890ADF4 (ACTIN DEPOLYMERIZING FACTOR 4)O.I.H.G.S.X.
0.1922.40.96Ta.2502.1.S1_a_atBJ241868HSP80-2-0At5g56000heat shock protein 81-4 (HSP81-4)O.I.H.G.S.X.
0.1821.00.96Ta.27101.10.S1_x_atAJ613323--1e-26At5g10980histone H3O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.597.8GSM314261tissue type: seedling, root - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
4.496.8GSM250895Tc_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.496.8GSM139928Anther immature pollen rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
4.496.8GSM314260tissue type: seedling, root - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
3.996.1GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.996.1GSM314262tissue type: seedling, root - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
3.695.6GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.194.5GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
2.994.0GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
2.893.6GSM139931Anther maturea nthers rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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