Co-expression analysis

Gene ID Ta.12665.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g10840: endomembrane protein 70, putative (HF=2e-76)
Module size 6 genes
NF 0.31
%ile 50.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4464.50.97Ta.12665.1.S1_atCK196684--2e-76At5g10840endomembrane protein 70, putativeO.I.H.G.S.X.
0.5779.20.97TaAffx.12998.3.S1_atBJ211963--1e+0At5g23420HMGB6O.I.H.G.S.X.
0.4058.40.97Ta.28202.1.S1_x_atCK205498--1e-3At5g42090-O.I.H.G.S.X.
0.3142.70.97Ta.7132.1.S1_atCA686456--1e-27At5g08160ATPK3O.I.H.G.S.X.
0.1719.80.97Ta.3036.2.S1_x_atBJ320080--4e+0At4g2941060S ribosomal protein L28 (RPL28C)O.I.H.G.S.X.
0.1517.10.97Ta.20778.1.A1_s_atCK205545--1e-2At5g35080protein bindingO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
10.399.2GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
5.797.9GSM250895Tc_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
5.297.5GSM250897TcLr1_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.096.3GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.795.8GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.294.8GSM250896Tc_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
2.592.5GSM298090Leaf tissue of Solstice at 5 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
2.592.5GSM138162genotype E5 developing seed at 5 days after anthesis, biological rep1GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB locationLink to GEO
2.391.5GSM139923Anther telophaseI-telophaseII rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
2.089.7GSM298089Leaf tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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