Co-expression analysis

Gene ID	Ta.12649.1.S1_at
Gene name
Homology with Arabidopsis	Similar to Atmg00980: - (HF=2e+1)
Module size	6 genes
NF	0.78
%ile	96.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.2	1.00	Ta.12649.1.S1_at	BQ171952	-	-	2e+1	Atmg00980	-	O.I.	H.G.	S.X.	Please select
0.91	98.2	1.00	Ta.25258.1.S1_at	CD908196	-	-	4e-21	At3g04060	anac046 (Arabidopsis NAC domain containing protein 46)	O.I.	H.G.	S.X.	Please select
0.77	90.8	1.00	Ta.6175.2.A1_x_at	BJ240530	-	-	1e+0	At3g49550	unknown protein	O.I.	H.G.	S.X.	Please select
0.71	88.0	1.00	Ta.24114.15.A1_x_at	BJ240538	Alpha/beta-gliadin precursor	-	6e-1	At4g30070	LCR59 (Low-molecular-weight cysteine-rich 59)	O.I.	H.G.	S.X.	Please select
0.59	79.8	1.00	Ta.119.1.S1_x_at	CD915759	serpin	-	3e+0	At2g26390	serpin, putative / serine protease inhibitor, putative	O.I.	H.G.	S.X.	Please select
0.57	79.2	1.00	TaAffx.120246.1.S1_x_at	AJ437000.1	-	-	1e+0	At1g53030	cytochrome c oxidase copper chaperone family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
42.5	99.9	GSM314288	tissue type: 22 DAP endosperm - rep2	GSE12508	Transcription patterns during wheat development
41.2	99.9	GSM314289	tissue type: 22 DAP endosperm - rep3	GSE12508	Transcription patterns during wheat development
40.2	99.9	GSM314287	tissue type: 22 DAP endosperm - rep1	GSE12508	Transcription patterns during wheat development
12.6	99.4	GSM324493	Si+ B+ rep1	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
11.4	99.3	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
10.5	99.2	GSM139931	Anther maturea nthers rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
8.3	98.8	GSM315203	target strand labeled: Antisense - rep1	GSE12528	Wheat "Chinese Spring" natural antisense transcription survey
7.5	98.6	GSM139932	Anther mature anthers rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
6.0	98.0	GSM314280	tissue type: anthers, before anthesis - rep3	GSE12508	Transcription patterns during wheat development
5.7	97.9	GSM314278	tissue type: anthers, before anthesis - rep1	GSE12508	Transcription patterns during wheat development

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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