Co-expression analysis

Gene ID	Ta.12414.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At5g23880: CPSF100 (CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR 100) (HF=2e-9)
Module size	6 genes
NF	0.77
%ile	96.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.2	0.98	Ta.12414.1.S1_at	BQ172285	-	-	2e-9	At5g23880	CPSF100 (CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR 100)	O.I.	H.G.	S.X.	Please select
0.91	98.2	0.98	TaAffx.12795.1.S1_at	CA655454	-	-	1e+1	At4g16710	glycosyltransferase family protein 28	O.I.	H.G.	S.X.	Please select
0.73	89.1	0.98	Ta.121.1.S1_at	U49387.1	adenylosuccinate synthetase	-	1e-15	At3g57610	ADSS (ADENYLOSUCCINATE SYNTHASE)	O.I.	H.G.	S.X.	Please select
0.67	86.3	0.98	Ta.4599.1.S1_at	CK200209	-	-	4e-28	At5g56680	SYNC1	O.I.	H.G.	S.X.	Please select
0.59	79.8	0.98	Ta.14416.2.A1_a_at	BJ271618	-	-	3e-4	At4g31180	aspartyl-tRNA synthetase, putative / aspartate--tRNA ligase, putative	O.I.	H.G.	S.X.	Please select
0.44	64.5	0.98	Ta.7226.1.S1_at	BJ277021	-	-	2e-7	At5g27540	MIRO1 (Miro-related GTP-ase 1)	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
8.4	98.9	GSM139930	Anther immature pollen rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
7.5	98.6	GSM139928	Anther immature pollen rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
7.0	98.5	GSM139926	Anther tetrads rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
6.1	98.1	GSM139927	Anther tetrads rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
6.0	98.0	GSM139925	Anther tetrads rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.0	96.3	GSM298081	Leaf tissue of Solstice at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
3.9	96.1	GSM250884	Tc_3dpi_inoculated_rep1	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.8	96.0	GSM298082	Leaf tissue of Solstice at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
3.6	95.6	GSM250883	Tc_3dpi_mock_rep1	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.4	95.2	GSM250914	Tc_7dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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