Co-expression analysis

Gene ID	Ta.12339.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At1g24400: LHT2 (LYSINE HISTIDINE TRANSPORTER 2) (HF=5e-15)
Module size	6 genes
NF	0.46
%ile	72.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.2	0.91	Ta.12339.1.S1_at	BT009250.1	-	-	5e-15	At1g24400	LHT2 (LYSINE HISTIDINE TRANSPORTER 2)	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.92	Ta.14315.1.S1_at	BU099779	-	-	5e+0	At5g05230	ubiquitin-protein ligase	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.94	Ta.12339.1.S1_s_at	BT009250.1	-	-	5e-15	At1g24400	LHT2 (LYSINE HISTIDINE TRANSPORTER 2)	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.96	Ta.28479.1.S1_at	BJ286275	-	-	9e-6	At5g40780	LHT1	O.I.	H.G.	S.X.	Please select
0.32	44.4	0.91	Ta.25985.1.A1_at	CD454279	-	-	1e+0	At4g03965	protein binding / zinc ion binding	O.I.	H.G.	S.X.	Please select
0.19	22.4	0.92	Ta.10084.1.S1_at	AF110180.1	high-affinity phosphate transporter PT1	-	3e-7	At5g43360	PHT3 (PHOSPHATE TRANSPORTER 3)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
22.3	99.8	GSM314287	tissue type: 22 DAP endosperm - rep1	GSE12508	Transcription patterns during wheat development
17.6	99.7	GSM314289	tissue type: 22 DAP endosperm - rep3	GSE12508	Transcription patterns during wheat development
12.7	99.4	GSM314288	tissue type: 22 DAP endosperm - rep2	GSE12508	Transcription patterns during wheat development
4.3	96.7	GSM314269	tissue type: immature inflorescence - rep1	GSE12508	Transcription patterns during wheat development
3.4	95.2	GSM250914	Tc_7dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.4	95.2	GSM314265	tissue type: seedling, crown - rep3	GSE12508	Transcription patterns during wheat development
3.1	94.5	GSM314270	tissue type: immature inflorescence - rep2	GSE12508	Transcription patterns during wheat development
2.9	94.0	GSM324488	Si- B+ rep2	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
2.7	93.3	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
2.6	92.9	GSM314264	tissue type: seedling, crown - rep2	GSE12508	Transcription patterns during wheat development

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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