Co-expression analysis

Gene ID Ta.12050.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At1g04350: 2-oxoglutarate-dependent dioxygenase, putative (HF=1e-3)
Module size 10 genes
NF 0.43
%ile 67.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6383.10.96Ta.12050.1.A1_atBQ171485--1e-3At1g043502-oxoglutarate-dependent dioxygenase, putativeO.I.H.G.S.X.
0.5979.80.97Ta.2946.1.S1_atBQ161671--6e-1At1g26740structural constituent of ribosomeO.I.H.G.S.X.
0.5072.40.97Ta.616.2.S1_a_atBG906649--2e-1At5g19850hydrolase, alpha/beta fold family proteinO.I.H.G.S.X.
0.4464.50.97Ta.23299.3.A1_atCA601235--7e-1At5g56280CSN6AO.I.H.G.S.X.
0.4464.50.98Ta.4786.1.S1_atCK213349--5e-2At2g26510PDE135 (pigment defective embryo 135)O.I.H.G.S.X.
0.4362.20.98Ta.8721.1.S1_atBQ162272--1e-1At5g39170unknown proteinO.I.H.G.S.X.
0.4362.20.98Ta.9731.2.S1_a_atCK161387--3e-10At3g63520CCD1 (CAROTENOID CLEAVAGE DIOXYGENASE 1)O.I.H.G.S.X.
0.3549.80.98Ta.14598.1.S1_atCK163954Peroxisomal ascorbate peroxidase-2e-13At4g35000APX3 (ASCORBATE PEROXIDASE 3)O.I.H.G.S.X.
0.2633.60.97Ta.6077.1.S1_atCA652767--4e-8At3g26710CCB1 (COFACTOR ASSEMBLY OF COMPLEX C)O.I.H.G.S.X.
0.2024.00.98TaAffx.58678.1.S1_atCA617348--2e+0At4g01671unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
8.898.9GSM314272tissue type: floral bracts, before anthesis - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
7.198.5GSM314273tissue type: floral bracts, before anthesis - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
7.098.5GSM314274tissue type: floral bracts, before anthesis - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
6.998.4GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
6.198.1GSM250895Tc_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
5.998.0GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.697.0GSM250896Tc_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.496.8GSM250897TcLr1_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.695.6GSM139925Anther tetrads rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
3.194.5GSM139927Anther tetrads rep3GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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