Co-expression analysis

Gene ID	Ta.12037.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At1g31780: - (HF=2e-21)
Module size	6 genes
NF	0.43
%ile	67.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	86.3	0.98	Ta.12037.1.S1_at	BQ171315	-	-	2e-21	At1g31780	-	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.98	Ta.497.2.S1_a_at	CA635451	-	-	1e-7	At4g14160	transport protein, putative	O.I.	H.G.	S.X.	Please select
0.44	64.5	0.98	Ta.29317.1.A1_s_at	BQ170900	-	-	1e+0	At1g77940	60S ribosomal protein L30 (RPL30B)	O.I.	H.G.	S.X.	Please select
0.44	64.5	0.98	Ta.497.1.S1_x_at	CK156533	-	-	1e-13	At3g23660	transport protein, putative	O.I.	H.G.	S.X.	Please select
0.29	39.2	0.98	Ta.2136.1.S1_at	BJ320333	-	-	7e-9	At1g50200	ALATS (ALANYL-TRNA SYNTHETASE)	O.I.	H.G.	S.X.	Please select
0.21	25.5	0.98	Ta.735.1.S1_at	CK215595	-	-	2e-66	At3g62120	tRNA synthetase class II (G, H, P and S) family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
19.1	99.7	GSM314288	tissue type: 22 DAP endosperm - rep2	GSE12508	Transcription patterns during wheat development
18.5	99.7	GSM314289	tissue type: 22 DAP endosperm - rep3	GSE12508	Transcription patterns during wheat development
15.5	99.6	GSM314287	tissue type: 22 DAP endosperm - rep1	GSE12508	Transcription patterns during wheat development
4.1	96.4	GSM250912	TcLr34_7dpi_inoculated_rep2	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.4	95.2	GSM314272	tissue type: floral bracts, before anthesis - rep1	GSE12508	Transcription patterns during wheat development
2.9	94.0	GSM143506	Thatcher_Lr34 (resistant), rust inoculated distal leaf, replication 2	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
2.7	93.3	GSM250906	TcLr34_7dpi_inoculated_rep1	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
2.7	93.3	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
2.7	93.3	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
2.6	92.9	GSM314286	tissue type: 22 DAP embryo - rep3	GSE12508	Transcription patterns during wheat development

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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