Co-expression analysis

Gene ID Ta.12037.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At1g31780: - (HF=2e-21)
Module size 6 genes
NF 0.43
%ile 67.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6786.30.98Ta.12037.1.S1_atBQ171315--2e-21At1g31780-O.I.H.G.S.X.
0.5072.40.98Ta.497.2.S1_a_atCA635451--1e-7At4g14160transport protein, putativeO.I.H.G.S.X.
0.4464.50.98Ta.29317.1.A1_s_atBQ170900--1e+0At1g7794060S ribosomal protein L30 (RPL30B)O.I.H.G.S.X.
0.4464.50.98Ta.497.1.S1_x_atCK156533--1e-13At3g23660transport protein, putativeO.I.H.G.S.X.
0.2939.20.98Ta.2136.1.S1_atBJ320333--7e-9At1g50200ALATS (ALANYL-TRNA SYNTHETASE)O.I.H.G.S.X.
0.2125.50.98Ta.735.1.S1_atCK215595--2e-66At3g62120tRNA synthetase class II (G, H, P and S) family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
19.199.7GSM314288tissue type: 22 DAP endosperm - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
18.599.7GSM314289tissue type: 22 DAP endosperm - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
15.599.6GSM314287tissue type: 22 DAP endosperm - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
4.196.4GSM250912TcLr34_7dpi_inoculated_rep2GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.495.2GSM314272tissue type: floral bracts, before anthesis - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
2.994.0GSM143506Thatcher_Lr34 (resistant), rust inoculated distal leaf, replication 2GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halvesLink to GEO
2.793.3GSM250906TcLr34_7dpi_inoculated_rep1GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
2.793.3GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
2.793.3GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
2.692.9GSM314286tissue type: 22 DAP embryo - rep3GSE12508Transcription patterns during wheat developmentLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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