Co-expression analysis

Gene ID	Ta.1143.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At1g64550: ATGCN3 (HF=1e-13)
Module size	7 genes
NF	0.35
%ile	57.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.50	72.4	0.98	Ta.1143.1.S1_at	BF473597	-	-	1e-13	At1g64550	ATGCN3	O.I.	H.G.	S.X.	Please select
0.67	86.3	0.98	Ta.3352.1.S1_at	CK206169	-	-	2e-52	At5g64270	splicing factor, putative	O.I.	H.G.	S.X.	Please select
0.48	69.0	0.98	Ta.4661.1.S1_at	BG314545	-	-	2e-27	At5g47010	LBA1 (LOW-LEVEL BETA-AMYLASE 1)	O.I.	H.G.	S.X.	Please select
0.40	58.4	0.98	Ta.4661.1.S1_s_at	BG314545	-	-	2e-27	At5g47010	LBA1 (LOW-LEVEL BETA-AMYLASE 1)	O.I.	H.G.	S.X.	Please select
0.29	39.2	0.98	Ta.12107.1.A1_at	BJ218492	-	-	1e+0	At4g04580	myb family transcription factor	O.I.	H.G.	S.X.	Please select
0.22	27.1	0.98	Ta.9802.1.A1_at	BJ232036	-	-	1e+0	At1g23050	hydroxyproline-rich glycoprotein family protein	O.I.	H.G.	S.X.	Please select
0.20	24.0	0.98	Ta.4582.1.S1_at	CK172043	-	-	3e-23	At3g52140	tetratricopeptide repeat (TPR)-containing protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
21.7	99.8	GSM314275	tissue type: pistil, before anthesis - rep1	GSE12508	Transcription patterns during wheat development
20.4	99.7	GSM314277	tissue type: pistil, before anthesis - rep3	GSE12508	Transcription patterns during wheat development
13.3	99.5	GSM314276	tissue type: pistil, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
4.3	96.7	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.9	96.1	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
3.3	95.0	GSM250899	TcLr34_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.1	94.5	GSM250895	Tc_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
2.8	93.6	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
2.7	93.3	GSM324495	Si+ B+ rep3	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
2.5	92.5	GSM250896	Tc_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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