Co-expression analysis

Gene ID	Ta.11338.3.S1_x_at
Gene name
Homology with Arabidopsis	Similar to At3g47200: unknown protein (HF=4e+0)
Module size	6 genes
NF	0.21
%ile	36.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.77	90.8	0.95	Ta.11338.3.S1_x_at	CA647367	-	-	4e+0	At3g47200	unknown protein	O.I.	H.G.	S.X.	Please select
0.33	46.9	0.95	TaAffx.110345.1.S1_at	CA660143	-	-	4e+0	At5g24270	SOS3 (SALT OVERLY SENSITIVE 3)	O.I.	H.G.	S.X.	Please select
0.24	30.3	0.94	TaAffx.75287.1.A1_at	BQ169236	-	-	5e+0	At1g64370	unknown protein	O.I.	H.G.	S.X.	Please select
0.16	18.2	0.95	TaAffx.49165.1.S1_x_at	CA640875	-	-	2e+0	At1g80340	GA3OX2 (GIBBERELLIN 3-OXIDASE 2)	O.I.	H.G.	S.X.	Please select
0.13	14.6	0.95	Ta.3463.3.S1_a_at	CA681836	-	-	2e-5	At4g36410	UBC17 (UBIQUITIN-CONJUGATING ENZYME 17)	O.I.	H.G.	S.X.	Please select
0.11	12.4	0.95	Ta.6439.1.A1_x_at	BJ311211	-	-	3e+0	At5g57150	basic helix-loop-helix (bHLH) family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
6.0	98.0	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.8	97.2	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.3	96.7	GSM250896	Tc_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.0	96.3	GSM250895	Tc_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.6	95.6	GSM250899	TcLr34_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.5	95.4	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
3.3	95.0	GSM250897	TcLr1_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.1	94.5	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
3.0	94.3	GSM324495	Si+ B+ rep3	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
2.9	94.0	GSM324484	Si- B- rep1	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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