Co-expression analysis

Gene ID Ta.11160.1.S1_s_at
Gene name
Homology with ArabidopsisSimilar to At3g07010: pectate lyase family protein (HF=5e-14)
Module size 10 genes
NF 0.70
%ile 92.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6081.00.91Ta.11160.1.S1_s_atBQ169530--5e-14At3g07010pectate lyase family proteinO.I.H.G.S.X.
0.8994.60.95Ta.25311.1.A1_atBJ251878--4e+0At3g10185-O.I.H.G.S.X.
0.8092.20.94Ta.25311.2.S1_s_atCA714639--8e-1At1g05710ethylene-responsive protein, putativeO.I.H.G.S.X.
0.8092.20.95Ta.4851.1.A1_atCD886739--9e+0At5g65609unknown proteinO.I.H.G.S.X.
0.7891.10.96TaAffx.94481.1.S1_atBF484298--2e+1At2g36295unknown proteinO.I.H.G.S.X.
0.7389.10.95TaAffx.1992.1.S1_atBJ275316--1e+0At5g03840TFL1 (TERMINAL FLOWER 1)O.I.H.G.S.X.
0.6383.10.94Ta.27343.1.S1_atBJ275567--2e-5At1g44100AAP5O.I.H.G.S.X.
0.6081.00.95TaAffx.5570.1.S1_atCA706448--3e+0At1g45190unknown proteinO.I.H.G.S.X.
0.5273.70.95TaAffx.65399.1.S1_atBJ247900--2e-1At1g48410AGO1 (ARGONAUTE 1)O.I.H.G.S.X.
0.5273.70.95Ta.8444.1.A1_atBQ161906--3e+0At3g60010ASK13 (ARABIDOPSIS SKP1-LIKE 13)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
31.099.9GSM314279tissue type: anthers, before anthesis - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
15.899.6GSM314280tissue type: anthers, before anthesis - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
12.199.4GSM314278tissue type: anthers, before anthesis - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
11.999.4GSM324488Si- B+ rep2GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
8.398.8GSM324487Si- B+ rep1GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
6.398.2GSM298079Leaf tissue of Solstice at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
5.897.9GSM314276tissue type: pistil, before anthesis - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
5.797.9GSM298082Leaf tissue of Solstice at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
5.697.8GSM139932Anther mature anthers rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
5.497.7GSM139931Anther maturea nthers rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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