Co-expression analysis

Gene ID Ta.1099.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At1g78100: F-box family protein (HF=5e-2)
Module size 6 genes
NF 0.15
%ile 28.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.20.92Ta.1099.1.A1_atBG908718--5e-2At1g78100F-box family proteinO.I.H.G.S.X.
0.3651.90.95TaAffx.50764.1.S1_x_atCA735651--6e-1At5g16880VHS domain-containing protein / GAT domain-containing proteinO.I.H.G.S.X.
0.2633.60.95Ta.17530.1.S1_atCA621560--2e+0At5g64880unknown proteinO.I.H.G.S.X.
0.2430.30.93TaAffx.118165.1.S1_atCA633688--5e-1At2g34123-O.I.H.G.S.X.
0.1011.30.96TaAffx.42375.1.S1_atBE213239--3e+0At4g17230SCL13 (Scarecrow-like 13)O.I.H.G.S.X.
0.034.70.95Ta.10362.2.A1_a_atBJ300127--4e+0At4g35295homoserine kinase, putative / HSK, putativeO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.998.4GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
6.098.0GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
5.998.0GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
5.697.8GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
5.197.5GSM250895Tc_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.296.6GSM250896Tc_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.996.1GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.896.0GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.896.0GSM298090Leaf tissue of Solstice at 5 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.294.8GSM250908Tc_7dpi_inoculated_rep2GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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