Co-expression analysis

Gene ID	Ta.10983.1.S1_a_at
Gene name
Homology with Arabidopsis	Similar to At3g53530: heavy-metal-associated domain-containing protein (HF=3e+0)
Module size	6 genes
NF	0.49
%ile	75.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	86.3	0.98	Ta.10983.1.S1_a_at	BQ166964	-	-	3e+0	At3g53530	heavy-metal-associated domain-containing protein	O.I.	H.G.	S.X.	Please select
0.67	86.3	0.98	Ta.1252.1.S1_at	BJ293974	-	-	4e-6	At4g16830	nuclear RNA-binding protein (RGGA)	O.I.	H.G.	S.X.	Please select
0.60	81.0	0.98	Ta.20453.1.S1_at	CD932281	-	-	3e-2	At4g39745	hydroxyproline-rich glycoprotein family protein	O.I.	H.G.	S.X.	Please select
0.55	76.8	0.98	Ta.21252.3.S1_at	CA630645	-	-	1e+0	At2g45640	SAP18 (SIN3 ASSOCIATED POLYPEPTIDE P18)	O.I.	H.G.	S.X.	Please select
0.44	64.5	0.98	Ta.22567.1.S1_x_at	CA689116	-	-	3e-6	At1g11360	universal stress protein (USP) family protein	O.I.	H.G.	S.X.	Please select
0.15	17.1	0.98	Ta.14707.1.S1_at	CD870546	Eukaryotic initiation factor 4E p26 subunit	-	1e-7	At1g29550	eukaryotic translation initiation factor 4E, putative / eIF-4E, putative / eIF4E, putative / mRNA cap-binding protein, putative	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
6.8	98.4	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
4.5	96.9	GSM139914	Anther pre-meiosis rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.2	96.6	GSM298061	Crown tissue of Harnesk at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
3.7	95.8	GSM298062	Crown tissue of Harnesk at 5 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
3.7	95.8	GSM298060	Crown tissue of Harnesk at 3 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
3.6	95.6	GSM139912	Anther pre-meiosis rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.5	95.4	GSM298064	Crown tissue of Harnesk at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
3.4	95.2	GSM298086	Crown tissue of Solstice at 5 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
3.3	95.0	GSM298074	Crown tissue of Paragon at 5 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
3.2	94.8	GSM298073	Crown tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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