Co-expression analysis

Gene ID	Ta.10642.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At4g17900: zinc-binding family protein (HF=1e+0)
Module size	6 genes
NF	0.47
%ile	72.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.2	0.96	Ta.10642.1.S1_at	CA612878	-	-	1e+0	At4g17900	zinc-binding family protein	O.I.	H.G.	S.X.	Please select
0.77	90.8	0.97	Ta.10642.1.S1_x_at	CA612878	-	-	1e+0	At4g17900	zinc-binding family protein	O.I.	H.G.	S.X.	Please select
0.73	89.1	0.96	Ta.20467.1.S1_at	CA656553	-	-	9e+0	At5g23600	tRNA 2'phosphotransferase, putative	O.I.	H.G.	S.X.	Please select
0.29	39.2	0.98	Ta.5047.1.S1_a_at	CA683741	-	-	4e-30	At3g04500	RNA recognition motif (RRM)-containing protein	O.I.	H.G.	S.X.	Please select
0.21	25.5	0.97	Ta.7011.1.S1_x_at	CA498741	-	-	8e-20	At4g39910	ATUBP3 (ARABIDOPSIS THALIANA UBIQUITIN-SPECIFIC PROTEASE 3)	O.I.	H.G.	S.X.	Please select
0.17	19.8	0.97	Ta.12758.1.S1_x_at	BM136354	-	-	2e+0	At5g56980	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
9.8	99.1	GSM314277	tissue type: pistil, before anthesis - rep3	GSE12508	Transcription patterns during wheat development
7.6	98.7	GSM314275	tissue type: pistil, before anthesis - rep1	GSE12508	Transcription patterns during wheat development
6.8	98.4	GSM314276	tissue type: pistil, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
4.7	97.1	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
4.2	96.6	GSM250896	Tc_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.1	96.4	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.8	96.0	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
3.1	94.5	GSM250895	Tc_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.0	94.3	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
2.6	92.9	GSM314270	tissue type: immature inflorescence - rep2	GSE12508	Transcription patterns during wheat development

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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