Co-expression analysis

Gene ID	Ta.10572.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At4g37240: unknown protein (HF=4e+0)
Module size	11 genes
NF	0.45
%ile	69.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.46	66.8	0.92	Ta.10572.1.S1_at	BJ258058	-	-	4e+0	At4g37240	unknown protein	O.I.	H.G.	S.X.	Please select
0.58	79.2	0.94	TaAffx.38268.1.A1_at	BJ242361	-	-	1e+0	At1g21326	VQ motif-containing protein	O.I.	H.G.	S.X.	Please select
0.52	73.7	0.94	Ta.3083.2.A1_at	BJ254365	-	-	4e+0	At3g05602	unknown protein	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.94	Ta.3478.3.S1_x_at	CA637826	-	-	2e-11	At1g69670	CUL3B (CULLIN 3B)	O.I.	H.G.	S.X.	Please select
0.48	69.0	0.95	Ta.14146.3.S1_x_at	CA697368	-	-	2e+1	At5g24313	unknown protein	O.I.	H.G.	S.X.	Please select
0.47	67.9	0.95	TaAffx.34241.2.S1_x_at	CA722326	-	-	4e+0	At5g51960	-	O.I.	H.G.	S.X.	Please select
0.45	65.2	0.94	Ta.14305.1.A1_at	BU099616	-	-	2e+0	At2g20260	PSAE-2 (photosystem I subunit E-2)	O.I.	H.G.	S.X.	Please select
0.40	58.4	0.95	TaAffx.34241.2.S1_at	CA722326	-	-	4e+0	At5g51960	-	O.I.	H.G.	S.X.	Please select
0.33	46.9	0.94	Ta.2593.3.S1_x_at	CA665053	-	-	4e-1	At4g23980	ARF9 (AUXIN RESPONSE FACTOR 9)	O.I.	H.G.	S.X.	Please select
0.31	42.7	0.94	TaAffx.56155.1.S1_at	CA656564	-	-	1e+1	At5g26070	hydroxyproline-rich glycoprotein family protein	O.I.	H.G.	S.X.	Please select
0.23	29.0	0.95	TaAffx.64591.1.S1_at	BJ288225	-	-	1e+0	At1g19010	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
5.9	98.0	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.3	97.6	GSM298064	Crown tissue of Harnesk at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
5.2	97.5	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
4.8	97.2	GSM298063	Crown tissue of Harnesk at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
4.3	96.7	GSM250899	TcLr34_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.1	96.4	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.7	95.8	GSM298062	Crown tissue of Harnesk at 5 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
3.7	95.8	GSM298059	Crown tissue of Harnesk at 3 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
3.4	95.2	GSM298061	Crown tissue of Harnesk at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
3.4	95.2	GSM298087	Crown tissue of Solstice at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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