Co-expression analysis

Gene ID	Ta.10569.1.A1_at
Gene name
Homology with Arabidopsis	Similar to At5g18590: kelch repeat-containing protein (HF=1e+0)
Module size	7 genes
NF	0.41
%ile	65.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.57	79.2	0.95	Ta.10569.1.A1_at	CK208173	-	-	1e+0	At5g18590	kelch repeat-containing protein	O.I.	H.G.	S.X.	Please select
0.57	79.2	0.96	Ta.7161.1.S1_at	BJ316315	-	-	3e+0	Atmg00840	-	O.I.	H.G.	S.X.	Please select
0.55	76.8	0.97	Ta.10026.1.A1_at	BJ236992	calcium-dependent protein kinase	-	1e-15	At3g51850	CPK13	O.I.	H.G.	S.X.	Please select
0.36	51.9	0.97	Ta.11183.1.A1_at	CD933832	-	-	2e+0	At3g57230	AGL16 (AGAMOUS-LIKE 16)	O.I.	H.G.	S.X.	Please select
0.29	39.2	0.97	Ta.5793.1.A1_a_at	CD895981	-	-	4e-11	At5g55230	ATMAP65-1 (MICROTUBULE-ASSOCIATED PROTEINS 65-1)	O.I.	H.G.	S.X.	Please select
0.22	27.1	0.97	Ta.6495.1.A1_at	CD936212	-	-	5e+0	Atcg00150	-	O.I.	H.G.	S.X.	Please select
0.19	22.4	0.96	TaAffx.36682.1.A1_at	BJ320081	-	-	4e+0	Atmg00060	-	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
7.7	98.7	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
7.0	98.5	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
6.0	98.0	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.4	97.7	GSM250899	TcLr34_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.6	97.0	GSM250897	TcLr1_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.6	97.0	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
4.4	96.8	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
4.1	96.4	GSM250895	Tc_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.7	95.8	GSM298090	Leaf tissue of Solstice at 5 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
3.6	95.6	GSM250896	Tc_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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