Co-expression analysis

Gene ID Ta.10408.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At1g10470: ARR4 (RESPONSE REGULATOR 4) (HF=2e-10)
Module size 6 genes
NF 0.14
%ile 27.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6786.30.90Ta.10408.1.S1_atCN009026--2e-10At1g10470ARR4 (RESPONSE REGULATOR 4)O.I.H.G.S.X.
0.6786.30.91Ta.11777.1.S1_x_atBQ620561--5e-1At3g49430SRp34a (Ser/Arg-rich protein 34a)O.I.H.G.S.X.
0.6081.00.89Ta.1909.1.A1_atBE446796--5e-2At3g55390integral membrane family proteinO.I.H.G.S.X.
0.5576.80.89TaAffx.119928.1.A1_s_atBJ251441--4e-2At1g14900HMGA (HIGH MOBILITY GROUP A)O.I.H.G.S.X.
0.5072.40.86Ta.11777.2.S1_atCA701022--3e-1At5g62720integral membrane HPP family proteinO.I.H.G.S.X.
0.034.70.86Ta.1630.2.S1_atCA668027--2e+0At3g14850unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
11.999.4GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
8.098.8GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
5.897.9GSM246397SB57_Stem_ rep2_at anthesisGSE9767Genotypic differences in water soluble carbohydrate metabolism in stemLink to GEO
4.797.1GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.396.7GSM298081Leaf tissue of Solstice at 9 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.896.0GSM298091Leaf tissue of Solstice at 9 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.795.8GSM324490Si+ B- rep1GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
3.595.4GSM324493Si+ B+ rep1GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
3.495.2GSM111208genotype F36 developing seed at 5 days after anthesis, biological rep1GSE4935wheat expression level polymorphism study 39 genotypes 2 biological repsLink to GEO
3.495.2GSM324491Si+ B- rep2GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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