Co-expression analysis

Gene ID	Ta.10284.1.S1_a_at
Gene name
Homology with Arabidopsis	Similar to At2g20840: secretory carrier membrane protein (SCAMP) family protein (HF=9e-19)
Module size	6 genes
NF	0.59
%ile	85.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.77	90.8	0.98	Ta.10284.1.S1_a_at	BU672165	-	-	9e-19	At2g20840	secretory carrier membrane protein (SCAMP) family protein	O.I.	H.G.	S.X.	Please select
0.63	83.1	0.98	Ta.9381.1.S1_at	CA655992	-	-	8e+0	At5g22930	unknown protein	O.I.	H.G.	S.X.	Please select
0.55	76.8	0.98	Ta.8549.1.S1_s_at	BQ162045	-	-	1e-55	At1g60780	HAP13 (HAPLESS 13)	O.I.	H.G.	S.X.	Please select
0.46	66.8	0.98	Ta.1931.1.S1_at	CA697901	-	-	3e-9	At3g60860	guanine nucleotide exchange family protein	O.I.	H.G.	S.X.	Please select
0.44	64.5	0.98	Ta.23710.1.S1_x_at	CK199390	-	-	5e-77	At3g13772	endomembrane protein 70, putative	O.I.	H.G.	S.X.	Please select
0.44	64.5	0.98	Ta.23710.2.A1_x_at	CK199049	-	-	1e-31	At3g13772	endomembrane protein 70, putative	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
5.0	97.4	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
4.1	96.4	GSM138161	genotype A91 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.7	95.8	GSM314256	tissue type: germinating seed, root - rep3	GSE12508	Transcription patterns during wheat development
3.4	95.2	GSM314254	tissue type: germinating seed, root - rep1	GSE12508	Transcription patterns during wheat development
3.4	95.2	GSM298061	Crown tissue of Harnesk at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
2.9	94.0	GSM314255	tissue type: germinating seed, root - rep2	GSE12508	Transcription patterns during wheat development
2.7	93.3	GSM111187	genotype B68 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
2.5	92.5	GSM343682	Wheat var. Kennedy_control_rep2	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
2.5	92.5	GSM343688	Wheat var. Kennedy_Fp inoculated_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
2.5	92.5	GSM314257	tissue type: germinating seed, embryo - rep1	GSE12508	Transcription patterns during wheat development

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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