Co-expression analysis

Gene ID Ta.10124.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g47080: CKB1 (HF=2e-78)
Module size 24 genes
NF 0.23
%ile 39.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8593.80.95Ta.10124.1.S1_atBJ218430--2e-78At5g47080CKB1O.I.H.G.S.X.
0.4869.00.96Ta.21132.3.S1_a_atBJ308026--1e+0At3g15960ATP binding / mismatched DNA bindingO.I.H.G.S.X.
0.3346.90.96Ta.6488.1.S1_atCD490561--2e+0At5g30341unknown proteinO.I.H.G.S.X.
0.3142.70.96Ta.4326.1.A1_atBQ170861--5e+0At4g34750auxin-responsive protein, putative / small auxin up RNA (SAUR_E)O.I.H.G.S.X.
0.2939.20.96TaAffx.22579.1.S1_atCA641583--7e+0At3g05700-O.I.H.G.S.X.
0.2839.20.96Ta.27007.1.S1_atCD490470--2e+0At3g13200EMB2769 (EMBRYO DEFECTIVE 2769)O.I.H.G.S.X.
0.2735.60.96Ta.21132.3.S1_x_atBJ308026--1e+0At3g15960ATP binding / mismatched DNA bindingO.I.H.G.S.X.
0.2735.60.96Ta.11584.2.S1_a_atBQ170400--3e-1At1g80700unknown proteinO.I.H.G.S.X.
0.2735.60.97Ta.12758.1.S1_x_atBM136354--2e+0At5g56980unknown proteinO.I.H.G.S.X.
0.2633.60.98Ta.27777.1.S1_atBJ321823--8e-8At3g13200EMB2769 (EMBRYO DEFECTIVE 2769)O.I.H.G.S.X.
0.2532.10.98Ta.829.1.S1_atBJ283440--2e-47At1g14400UBC1 (UBIQUITIN CARRIER PROTEIN 1)O.I.H.G.S.X.
0.2532.10.96Ta.8984.1.S1_atCK166731--5e-5At5g58740nuclear movement family proteinO.I.H.G.S.X.
0.2430.30.97Ta.4317.1.A1_a_atCA653407--2e+0At2g01790meprin and TRAF homology domain-containing protein / MATH domain-containing proteinO.I.H.G.S.X.
0.2329.00.96TaAffx.131691.1.S1_atBJ320808--5e+0At2g21150XCT (XAP5 CIRCADIAN TIMEKEEPER)O.I.H.G.S.X.
0.2125.50.97Ta.30414.1.S1_atCA606112--4e-21At4g27880seven in absentia (SINA) family proteinO.I.H.G.S.X.
0.2024.00.97Ta.9887.2.S1_a_atCK212824--8e-2At5g5729060S acidic ribosomal protein P3 (RPP3B)O.I.H.G.S.X.
0.2024.00.97Ta.20423.1.S1_atCD905592--6e-1At3g19580AZF2 (ARABIDOPSIS ZINC-FINGER PROTEIN 2)O.I.H.G.S.X.
0.1922.40.96Ta.6819.1.S1_atBJ323070--1e-5At1g63800UBC5 (ubiquitin-conjugating enzyme 5)O.I.H.G.S.X.
0.1922.40.97Ta.7176.1.S1_atCD490871--2e+0At5g05690CPD (CONSTITUTIVE PHOTOMORPHOGENIC DWARF)O.I.H.G.S.X.
0.1821.00.98Ta.7599.1.S1_atBJ219890--4e-15At1g60170emb1220 (embryo defective 1220)O.I.H.G.S.X.
0.1415.80.97Ta.3482.1.S1_atCD490942--5e-1At5g17170ENH1 (enhancer of sos3-1)O.I.H.G.S.X.
0.1415.80.98Ta.16078.1.A1_x_atCA597672--1e-1At1g79430APL (ALTERED PHLOEM DEVELOPMENT)O.I.H.G.S.X.
0.1112.40.96Ta.2768.1.S1_atAY036609.1serine/threonine protein kinase-1e-12At4g31170protein kinase family proteinO.I.H.G.S.X.
0.1011.30.96Ta.6555.1.S1_atCK208136--1e-12At5g63610CDKEO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
7.798.7GSM314279tissue type: anthers, before anthesis - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
5.998.0GSM314289tissue type: 22 DAP endosperm - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
5.297.5GSM314288tissue type: 22 DAP endosperm - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
5.297.5GSM314287tissue type: 22 DAP endosperm - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
5.197.5GSM314280tissue type: anthers, before anthesis - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
3.495.2GSM314267tissue type: seedling, leaf - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
3.194.5GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
2.893.6GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
2.793.3GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
2.492.0GSM314278tissue type: anthers, before anthesis - rep1GSE12508Transcription patterns during wheat developmentLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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