Co-expression analysis

Gene ID	Ta.10120.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At5g60600: HDS (4-HYDROXY-3-METHYLBUT-2-ENYL DIPHOSPHATE SYNTHASE) (HF=6e-14)
Module size	6 genes
NF	0.54
%ile	80.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.2	0.97	Ta.10120.1.S1_at	BJ224992	-	-	6e-14	At5g60600	HDS (4-HYDROXY-3-METHYLBUT-2-ENYL DIPHOSPHATE SYNTHASE)	O.I.	H.G.	S.X.	Please select
0.80	92.2	0.97	Ta.10120.1.S1_x_at	BJ224992	-	-	6e-14	At5g60600	HDS (4-HYDROXY-3-METHYLBUT-2-ENYL DIPHOSPHATE SYNTHASE)	O.I.	H.G.	S.X.	Please select
0.67	86.3	0.98	Ta.9584.1.S1_at	BJ228075	-	-	4e+0	At1g36240	60S ribosomal protein L30 (RPL30A)	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.97	Ta.1121.1.S1_at	BG904461	-	-	2e-1	At4g02370	unknown protein	O.I.	H.G.	S.X.	Please select
0.40	58.4	0.97	TaAffx.116357.1.A1_at	BJ275093	-	-	5e-16	At1g77930	DNAJ heat shock N-terminal domain-containing protein	O.I.	H.G.	S.X.	Please select
0.29	39.2	0.97	Ta.12169.1.S1_at	CD863887	-	-	1e+0	At1g16880	uridylyltransferase-related	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
12.6	99.4	GSM314273	tissue type: floral bracts, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
10.8	99.2	GSM314274	tissue type: floral bracts, before anthesis - rep3	GSE12508	Transcription patterns during wheat development
7.6	98.7	GSM324491	Si+ B- rep2	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
6.4	98.2	GSM314277	tissue type: pistil, before anthesis - rep3	GSE12508	Transcription patterns during wheat development
6.3	98.2	GSM324495	Si+ B+ rep3	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
5.2	97.5	GSM324490	Si+ B- rep1	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
5.1	97.5	GSM324486	Si- B- rep3	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
4.9	97.3	GSM324484	Si- B- rep1	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
4.9	97.3	GSM324492	Si+ B- rep3	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
4.8	97.2	GSM324485	Si- B- rep2	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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