Co-expression analysis

Gene ID	S0001000058H07F1_s_at
Gene name
Homology with Arabidopsis	Similar to At5g50180: protein kinase, putative (HF=4e+0)
Module size	6 genes
NF	0.70
%ile	91.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.1	0.93	S0001000058H07F1_s_at	S0001000058H07F1	-	-	4e+0	At5g50180	protein kinase, putative	O.I.	H.G.	S.X.	Please select
0.73	88.7	0.93	EBpi07_SQ001_B14_s_at	EBpi07_SQ001_B14	-	-	2e+0	At3g27520	unknown protein	O.I.	H.G.	S.X.	Please select
0.71	87.1	0.90	Contig10250_s_at	Contig10250	-	-	2e-5	At1g04950	TAF6 (TBP-ASSOCIATED FACTOR 6)	O.I.	H.G.	S.X.	Please select
0.67	84.7	0.93	Contig10392_at	Contig10392	-	-	1e-13	At1g16820	vacuolar ATP synthase catalytic subunit-related / V-ATPase-related / vacuolar proton pump-related	O.I.	H.G.	S.X.	Please select
0.50	66.9	0.89	Contig5240_at	Contig5240	-	-	4e-5	At2g43030	ribosomal protein L3 family protein	O.I.	H.G.	S.X.	Please select
0.50	66.9	0.93	Contig3728_at	Contig3728	-	-	9e-28	At3g62560	GTP-binding protein, putative	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.3	96.4	GSM261068	Albina f-17 Control rep1	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
3.8	95.7	GSM261076	Albina e-16 Control rep3	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
3.5	95.1	GSM261074	Albina e-16 Control rep1	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
3.0	93.8	GSM261062	Xantha s-46 Control rep1	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
2.9	93.4	GSM261069	Albina f-17 Control rep2	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
2.8	93.1	GSM261075	Albina e-16 Control rep2	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
2.6	92.3	GSM419977	Palea_Rep3	GSE16754	Comparative transcriptional profiling of organs of the barley spike
2.6	92.3	GSM440965	Control palea_Rep3	GSE17669	Gene expression in the barley spike during drought stress
2.6	92.3	GSM261070	Albina f-17 Control rep3	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
2.5	91.9	GSM372998	genotype: 11542 - pathogen isolates: K1 - time: 16 - rep1	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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