Co-expression analysis

Gene ID	S0001000055K01F1_at
Gene name
Homology with Arabidopsis	Similar to At2g24310: unknown protein (HF=3e+0)
Module size	6 genes
NF	0.54
%ile	74.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.1	0.86	S0001000055K01F1_at	S0001000055K01F1	-	-	3e+0	At2g24310	unknown protein	O.I.	H.G.	S.X.	Please select
0.73	88.7	0.89	Contig12570_at	Contig12570	-	-	5e-29	At3g53570	AFC1 (ARABIDOPSIS FUS3-COMPLEMENTING GENE 1)	O.I.	H.G.	S.X.	Please select
0.61	78.7	0.85	HVSMEl0011N19r2_x_at	HVSMEl0011N19r2	-	-	5e-1	At5g51900	cytochrome P450 family	O.I.	H.G.	S.X.	Please select
0.53	69.7	0.88	HB25K17r_at	HB25K17r	-	-	2e+0	At4g09260	unknown protein	O.I.	H.G.	S.X.	Please select
0.32	40.3	0.89	HB25J22r_x_at	HB25J22r	-	-	9e+0	At5g04790	unknown protein	O.I.	H.G.	S.X.	Please select
0.23	26.1	0.90	HVSMEl0002K19r2_at	HVSMEl0002K19r2	-	-	7e+0	At4g31790	diphthine synthase, putative (DPH5)	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
16.1	99.6	GSM431547	pathogen isolates: Mock - rep2	GSE17238	Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
7.7	98.6	GSM431569	pathogen isolates: Mock inoculated control - rep2	GSE17240	Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betae
7.7	98.6	GSM431549	pathogen isolates: Polymyxa graminis - rep1	GSE17238	Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
5.3	97.4	GSM431546	pathogen isolates: Mock - rep1	GSE17238	Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
5.2	97.4	GSM431572	pathogen isolates: Polymyxa betae - rep2	GSE17240	Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betae
5.0	97.2	GSM440968	Stressed palea_Rep3	GSE17669	Gene expression in the barley spike during drought stress
5.0	97.2	GSM382234	Root_Hg3	GSE15295	Mercury toxicity in barley roots
4.6	96.8	GSM440960	Stressed lemma_Rep1	GSE17669	Gene expression in the barley spike during drought stress
4.6	96.8	GSM431548	pathogen isolates: Mock - rep3	GSE17238	Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
4.5	96.7	GSM419976	Palea_Rep2	GSE16754	Comparative transcriptional profiling of organs of the barley spike

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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