Co-expression analysis

Gene ID S0001000007H12F1_at
Gene name
Homology with ArabidopsisSimilar to At5g11130: exostosin family protein (HF=2e+0)
Module size 6 genes
NF 0.47
%ile 65.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.10.93S0001000007H12F1_atS0001000007H12F1--2e+0At5g11130exostosin family proteinO.I.H.G.S.X.
0.5066.90.93Contig13331_s_atContig13331--6e-16At2g21860violaxanthin de-epoxidase-relatedO.I.H.G.S.X.
0.5066.90.93Contig20270_atContig20270--2e+0At4g28160hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.
0.4053.10.93Contig13245_atContig13245--1e-5At2g41500EMB2776O.I.H.G.S.X.
0.3342.60.93HZ50B12r_s_atHZ50B12r--7e+0At1g47278unknown proteinO.I.H.G.S.X.
0.1919.60.94HF01J12w_s_atHF01J12w--4e-1At2g32310-O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.696.8GSM282033Malting_day4_Harrington_rep4GSE11200Expression data from malting barley seedsLink to GEO
3.995.8GSM282031Malting_day1_Harrington_rep1GSE11200Expression data from malting barley seedsLink to GEO
3.595.1GSM238415Endosperm 8DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
3.194.1GSM372995genotype: 11542 - pathogen isolates: K1 - time: 8 - rep1GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
3.093.8GSM261054Bonus Hardened rep2GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
2.993.4GSM238428Embryo 16DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
2.893.1GSM238412Endosperm 4DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
2.893.1GSM373008genotype: 11542 - pathogen isolates: K1 - time: 32 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
2.792.7GSM261041Dicktoo-deacclimation-rep3GSE10329Low temperature stress in cv. DicktooLink to GEO
2.792.7GSM16082319% SWC rep1GSE6990Barley drought stressLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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