Co-expression analysis

Gene ID PtpAffx.95587.1.A1_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At5g53280: PDV1 (PLASTID DIVISION1) (HF=1e+0)
Module size 6 genes
NF 0.51
%ile 82.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6791.10.89PtpAffx.95587.1.A1_atCV240701hypothetical protein-1e+0At5g53280PDV1 (PLASTID DIVISION1)O.I.H.G.S.X.
0.6086.00.92PtpAffx.219974.1.S1_atpmrna36177hypothetical protein-2e-3At2g45040matrix metalloproteinaseO.I.H.G.S.X.
0.5582.20.89PtpAffx.953.2.A1_atCV276105--1e+0At4g21580oxidoreductase, zinc-binding dehydrogenase family proteinO.I.H.G.S.X.
0.4673.70.90PtpAffx.8582.1.S1_atCV262556--2e-1At1g19310zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.4067.00.89PtpAffx.213042.1.S1_atpmrna25523hypothetical protein-7e-15At5g51780basix helix-loop-helix (bHLH) family proteinO.I.H.G.S.X.
0.3052.00.90PtpAffx.84979.1.S1_atCV254755hypothetical protein-2e-4At5g06720peroxidase, putativeO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.196.8GSM327407Populus balsamifera_1006_root_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
4.495.9GSM136936Poplar in 1 x hrp + 0.25 % sucrose no bacteriaGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphereLink to GEO
4.095.3GSM327658Populus balsamifera_Female_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
4.095.3GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
4.095.3GSM327409Populus balsamifera_1006_root_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.694.5GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.293.5GSM327408Populus balsamifera_1006_root_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.092.9GSM136938Poplar contacted with P. aeruginosa PAO1 in 1 x hrp + 0.25 % sucroseGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphereLink to GEO
2.892.1GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.791.8GSM328292Populus x canescens root control_rep_05GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO

Inter-species module comparison

A co-expression module including the wheat gene, TaAffx.86317.1.S1_at, orthologous to the query gene, PtpAffx.95587.1.A1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.2939.2TaAffx.86317.1.S1_atAt5g53280--6e-7At4g27745-O.I.H.G.S.X.
0.6786.3Ta.6075.1.A1_atAt5g53280--1e-1At2g46670pseudo-response regulator, putative / timing of CAB expression 1-like protein, putativeO.I.H.G.S.X.
0.6786.3Ta.2541.1.S1_s_atAt5g53280cold acclimation protein WCOR615-2e+0At4g25550protein bindingO.I.H.G.S.X.
0.5072.4Ta.19621.1.S1_atAt5g53280--2e-1At5g66000unknown proteinO.I.H.G.S.X.
0.5072.4Ta.20117.1.S1_atAt5g53280--8e+0Atmg00210-O.I.H.G.S.X.
0.4666.8Ta.20117.1.S1_x_atAt5g53280--8e+0Atmg00210-O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Vitis_vinifera
Zea_mays



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