Co-expression analysis

Gene ID PtpAffx.95554.1.A1_at
Gene name cytochrome P450
Homology with ArabidopsisSimilar to At5g24910: CYP714A1 (HF=8e-6)
Module size 6 genes
NF 0.41
%ile 69.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9199.20.91PtpAffx.95554.1.A1_atCV266540cytochrome P450-8e-6At5g24910CYP714A1O.I.H.G.S.X.
0.8096.00.91PtpAffx.215579.1.S1_atpmrna29856cytochrome P450-1e-5At5g24910CYP714A1O.I.H.G.S.X.
0.6791.10.94PtpAffx.215579.1.S1_s_atpmrna29856cytochrome P450-1e-5At5g24910CYP714A1O.I.H.G.S.X.
0.3762.30.91PtpAffx.91907.1.S1_atCV268291hypothetical protein-2e-9At3g19990unknown proteinO.I.H.G.S.X.
0.2543.60.91PtpAffx.11475.1.A1_atCV244248hypothetical protein-1e-12At1g64440RHD1 (ROOT HAIR DEFECTIVE 1)O.I.H.G.S.X.
0.1830.80.91Ptp.4062.1.A1_atCV245827hypothetical protein-4e-2At4g24805methyltransferaseO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.998.0GSM328562Populus x canescens root hypoxia_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
5.597.1GSM327409Populus balsamifera_1006_root_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
4.195.5GSM328565Populus x canescens root hypoxia_rep_07GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
3.894.9GSM328284Populus x canescens root control_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
3.393.7GSM328564Populus x canescens root hypoxia_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.992.5GSM328567Populus x canescens root hypoxia_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.590.9GSM328558Populus x canescens root control_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.590.9GSM327281Populus balsamifera_20071015_Seedling_continuous_light_6d_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.088.0GSM328561Populus x canescens root control_rep_12GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.088.0GSM244430non infected tissue, biological rep1GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungiLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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