Co-expression analysis

Gene ID PtpAffx.9076.2.S1_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At1g05820: aspartic-type endopeptidase/ peptidase (HF=2e-3)
Module size 6 genes
NF 0.35
%ile 60.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4268.60.95PtpAffx.9076.2.S1_atBU809324hypothetical protein-2e-3At1g05820aspartic-type endopeptidase/ peptidaseO.I.H.G.S.X.
0.6791.10.95PtpAffx.200524.1.S1_atpmrna1055hypothetical protein-1e-30At1g50170ATSIRB (ARABIDOPSIS THALIANA SIROHYDROCHLORIN FERROCHELATASE B)O.I.H.G.S.X.
0.6388.10.95PtpAffx.93050.1.S1_atDN500932hypothetical protein-1e-7At3g48070protein binding / zinc ion bindingO.I.H.G.S.X.
0.4673.70.95Ptp.5383.1.S1_atAJ768686hypothetical protein-1e-32At5g22000RHF2A (RING-H2 GROUP F2A)O.I.H.G.S.X.
0.4067.00.95PtpAffx.158765.2.S1_s_atCF118958hypothetical protein-8e-35At3g52950CBS domain-containing protein / octicosapeptide/Phox/Bemp1 (PB1) domain-containing proteinO.I.H.G.S.X.
0.1525.30.95Ptp.6100.1.S1_s_atCV253262hypothetical protein-1e-13At3g57090BIGYINO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
2.188.6GSM327408Populus balsamifera_1006_root_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.987.2GSM328560Populus x canescens root control_rep_11GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
1.987.2GSM328285Populus x canescens root control_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
1.886.4GSM328557Populus x canescens root control_rep_08GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
1.886.4GSM328534Populus x canescens root control_rep_07GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
1.785.5GSM328063Populus x canescens leaf control_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
1.785.5GSM328292Populus x canescens root control_rep_05GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
1.785.5GSM328559Populus x canescens root control_rep_10GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
1.785.5GSM328567Populus x canescens root hypoxia_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
1.785.5GSM328558Populus x canescens root control_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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