Co-expression analysis

Gene ID PtpAffx.89457.1.A1_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At1g78955: CAMS1 (Camelliol C synthase 1) (HF=5e-22)
Module size 6 genes
NF 0.42
%ile 70.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6086.00.93PtpAffx.89457.1.A1_atDN492169hypothetical protein-5e-22At1g78955CAMS1 (Camelliol C synthase 1)O.I.H.G.S.X.
0.5984.90.93PtpAffx.206496.1.S1_atpmrna12888hypothetical protein-5e-33At4g02050sugar transporter, putativeO.I.H.G.S.X.
0.5078.60.95PtpAffx.18236.1.S1_atCV272788hypothetical protein-1e-10At1g09645unknown proteinO.I.H.G.S.X.
0.3357.50.94PtpAffx.33074.1.S1_atCK091989hypothetical protein-6e-65At5g42000ORMDL family proteinO.I.H.G.S.X.
0.3052.00.93PtpAffx.23406.1.S1_atCK091295hypothetical protein-7e-1At1g70960F-box family proteinO.I.H.G.S.X.
0.2747.10.95PtpAffx.3546.1.A1_atCV241865hypothetical protein-3e-33At5g10730binding / catalytic/ coenzyme bindingO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.096.6GSM327411Populus balsamifera_1006_differentiating_xylem_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
4.295.6GSM372097Clone3200_LPI5_N-_8w_rep1GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO
2.892.1GSM372098Clone3200_LPI5_N-_8w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO
2.791.8GSM328077Populus x canescens leaf control_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.590.9GSM327413Populus balsamifera_1006_differentiating_xylem_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.490.4GSM327380Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.389.8GSM327398Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.088.0GSM327397Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.088.0GSM372092Clone3200_LPI2_N-_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO
1.987.2GSM362886Clone1979_LPI2_N-_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO

Inter-species module comparison

A co-expression module including the wheat gene, TaAffx.119776.1.S1_at, orthologous to the query gene, PtpAffx.89457.1.A1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.9599.1TaAffx.119776.1.S1_atAt1g78955--2e-11At3g45130LAS1O.I.H.G.S.X.
0.9298.5TaAffx.120368.1.A1_x_atAt1g78955--4e+0At5g57920plastocyanin-like domain-containing proteinO.I.H.G.S.X.
0.9198.2Ta.3740.3.S1_a_atAt1g78955--4e+0At5g06270unknown proteinO.I.H.G.S.X.
0.9094.8Ta.10216.2.S1_atAt1g78955--4e+0At5g65880unknown proteinO.I.H.G.S.X.
0.8994.6Ta.8284.1.S1_atAt1g78955--1e-1At5g28830calcium-binding EF hand family proteinO.I.H.G.S.X.
0.8994.6Ta.18047.1.S1_atAt1g78955--9e+0At2g06095unknown proteinO.I.H.G.S.X.
0.8894.4Ta.10382.1.S1_atAt1g78955--4e+0At5g04850VPS60.2O.I.H.G.S.X.
0.8894.4TaAffx.38194.1.S1_atAt1g78955--3e-1At5g45280pectinacetylesterase, putativeO.I.H.G.S.X.
0.8894.4Ta.3740.1.A1_atAt1g78955--1e+0At2g25510unknown proteinO.I.H.G.S.X.
0.8794.2TaAffx.113450.1.S1_atAt1g78955--2e-1At4g01330ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinaseO.I.H.G.S.X.
0.8794.2TaAffx.133282.1.A1_atAt1g78955--4e+0At1g02180ferredoxin-relatedO.I.H.G.S.X.
0.8694.1TaAffx.119923.1.A1_atAt1g78955--4e+0At2g15500-O.I.H.G.S.X.
0.8694.1Ta.9264.3.S1_atAt1g78955--3e+0At5g07910leucine-rich repeat family proteinO.I.H.G.S.X.
0.8694.1TaAffx.12606.1.S1_atAt1g78955--1e+0At3g63420AGG1 (Arabidopsis Ggamma-subunit 1)O.I.H.G.S.X.
0.8694.1TaAffx.132123.1.A1_atAt1g78955--6e+0At5g48485DIR1 (DEFECTIVE IN INDUCED RESISTANCE 1)O.I.H.G.S.X.
0.8694.1Ta.9264.1.S1_atAt1g78955--2e+0At1g52540protein kinase, putativeO.I.H.G.S.X.
0.8694.1Ta.11392.1.A1_atAt1g78955--2e-2At5g49070KCS21 (3-KETOACYL-COA SYNTHASE 21)O.I.H.G.S.X.
0.8694.1Ta.30925.1.S1_atAt1g78955--1e+0At1g73030VPS46.2O.I.H.G.S.X.
0.8694.1TaAffx.65112.1.A1_atAt1g78955--2e+0At2g02700DC1 domain-containing proteinO.I.H.G.S.X.
0.8694.1Ta.9264.2.S1_a_atAt1g78955--4e+0At5g07910leucine-rich repeat family proteinO.I.H.G.S.X.
0.8694.1Ta.9165.1.S1_atAt1g78955--1e-1At5g10480PAS2 (PASTICCINO 2)O.I.H.G.S.X.
0.8694.1TaAffx.92842.1.S1_atAt1g78955--6e+0At5g19729unknown proteinO.I.H.G.S.X.
0.8694.1Ta.8284.2.A1_x_atAt1g78955--2e+0At1g44990unknown proteinO.I.H.G.S.X.
0.8694.1Ta.8284.2.A1_atAt1g78955--2e+0At1g44990unknown proteinO.I.H.G.S.X.
0.8694.1Ta.4141.1.A1_atAt1g78955--1e-1At5g10480PAS2 (PASTICCINO 2)O.I.H.G.S.X.
0.8694.1Ta.18638.1.S1_atAt1g78955--5e-4At3g15500ANAC055 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 55)O.I.H.G.S.X.
0.8593.8Ta.4072.1.A1_atAt1g78955--1e+0At2g42140VQ motif-containing proteinO.I.H.G.S.X.
0.8593.8Ta.9073.2.A1_atAt1g78955--9e+0Atcg00430-O.I.H.G.S.X.
0.8593.8Ta.9114.1.A1_x_atAt1g78955--3e-1At5g05950MEE60 (maternal effect embryo arrest 60)O.I.H.G.S.X.
0.8593.8TaAffx.12284.1.S1_atAt1g78955--2e+1At5g15802unknown proteinO.I.H.G.S.X.
0.8493.6Ta.9264.3.S1_x_atAt1g78955--3e+0At5g07910leucine-rich repeat family proteinO.I.H.G.S.X.
0.8493.6TaAffx.132123.1.A1_x_atAt1g78955--6e+0At5g48485DIR1 (DEFECTIVE IN INDUCED RESISTANCE 1)O.I.H.G.S.X.
0.8493.6Ta.10400.1.S1_atAt1g78955--2e+1At5g01640PRA1.B5 (PRENYLATED RAB ACCEPTOR 1.B5)O.I.H.G.S.X.
0.8393.4Ta.10270.2.A1_a_atAt1g78955--2e-2At3g49190condensation domain-containing proteinO.I.H.G.S.X.
0.8292.7Ta.9264.2.S1_atAt1g78955--4e+0At5g07910leucine-rich repeat family proteinO.I.H.G.S.X.
0.8292.7Ta.3860.1.A1_atAt1g78955--3e+0At1g32540LOL1 (LSD ONE LIKE 1)O.I.H.G.S.X.
0.7288.3Ta.9080.1.A1_atAt1g78955--1e-1At4g17150unknown proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Vitis_vinifera
Zea_mays



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