Co-expression analysis

Gene ID PtpAffx.87978.1.S1_s_at
Gene name leucine-rich repeat protein kinase
Homology with ArabidopsisSimilar to At5g62230: ERL1 (ERECTA-LIKE 1) (HF=1e-38)
Module size 7 genes
NF 0.67
%ile 94.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6791.10.90PtpAffx.87978.1.S1_s_atCX170242leucine-rich repeat protein kinase-1e-38At5g62230ERL1 (ERECTA-LIKE 1)O.I.H.G.S.X.
0.7794.90.90PtpAffx.216790.1.S1_s_atpmrna31796hypothetical protein-9e-1At5g47470nodulin MtN21 family proteinO.I.H.G.S.X.
0.7594.10.89Ptp.7099.1.S1_s_atBU810141hypothetical protein-4e+0At5g40430MYB22 (myb domain protein 22)O.I.H.G.S.X.
0.6388.10.91PtpAffx.64701.1.S1_x_atCV236236histone 2-3e-45At2g38810HTA8 (HISTONE H2A 8)O.I.H.G.S.X.
0.5683.90.90PtpAffx.29085.1.A1_s_atDN489411--4e+0At1g75700HVA22G (HVA22-LIKE PROTEIN G)O.I.H.G.S.X.
0.5380.50.91PtpAffx.64701.2.S1_atCX184746histone 2-6e-12At3g54560HTA11O.I.H.G.S.X.
0.4471.90.95PtpAffx.202524.1.S1_s_atpmrna5051hypothetical protein-6e-1At1g13700glucosamine/galactosamine-6-phosphate isomerase family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
10.899.1GSM327404Populus balsamifera_1006_young_leaf_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
4.996.5GSM327411Populus balsamifera_1006_differentiating_xylem_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
4.295.6GSM327412Populus balsamifera_1006_differentiating_xylem_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.992.5GSM327413Populus balsamifera_1006_differentiating_xylem_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.490.4GSM372092Clone3200_LPI2_N-_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO
2.289.3GSM327405Populus balsamifera_1006_young_leaf_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.088.0GSM362886Clone1979_LPI2_N-_4w_rep2GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO
2.088.0GSM327281Populus balsamifera_20071015_Seedling_continuous_light_6d_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.987.2GSM327407Populus balsamifera_1006_root_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.886.4GSM327408Populus balsamifera_1006_root_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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