Co-expression analysis

Gene ID	PtpAffx.86362.1.S1_s_at
Gene name	autoinhibited calcium ATPase /// autoinhibited calcium ATPase
Homology with Arabidopsis	Similar to At3g21180: ACA9 (AUTOINHIBITED CA(2+)-ATPASE 9) (HF=8e-86)
Module size	6 genes
NF	0.46
%ile	76.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	99.2	0.95	PtpAffx.86362.1.S1_s_at	CV274254	autoinhibited calcium ATPase /// autoinhibited calcium ATPase	-	8e-86	At3g21180	ACA9 (AUTOINHIBITED CA(2+)-ATPASE 9)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.60	86.0	0.95	PtpAffx.65890.1.S1_s_at	CN523643	hypothetical protein	-	5e-4	At4g18070	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.36	61.6	0.95	Ptp.7355.1.S1_s_at	CX174270	hypothetical protein	-	3e-24	At1g01710	acyl-CoA thioesterase family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.35	59.7	0.95	PtpAffx.24901.1.A1_at	CV242012	hypothetical protein	-	6e-3	At5g58390	peroxidase, putative	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.30	52.0	0.96	PtpAffx.159193.1.S1_at	BU891642	hypothetical protein	-	2e-18	At5g23670	LCB2	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.27	47.1	0.96	PtpAffx.12640.1.A1_at	CV240965	hypothetical protein	-	2e-148	At3g20290	ATEHD1 (EPS15 HOMOLOGY DOMAIN 1)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
7.3	98.2	GSM327412	Populus balsamifera_1006_differentiating_xylem_midday_2	GSE13990	Populus balsamifera developmental tissue series
4.3	95.8	GSM327411	Populus balsamifera_1006_differentiating_xylem_midday_1	GSE13990	Populus balsamifera developmental tissue series
4.0	95.3	GSM327413	Populus balsamifera_1006_differentiating_xylem_midday_3	GSE13990	Populus balsamifera developmental tissue series
3.9	95.1	GSM327661	Populus balsamifera_Male_Catkin_midday_3	GSE13990	Populus balsamifera developmental tissue series
2.5	90.9	GSM327658	Populus balsamifera_Female_Catkin_midday_3	GSE13990	Populus balsamifera developmental tissue series
2.2	89.3	GSM327657	Populus balsamifera_Female_Catkin_midday_2	GSE13990	Populus balsamifera developmental tissue series
2.0	88.0	GSM328105	Populus x canescens leaf hypoxia_rep_01	GSE13109	Effect of hypoxia on gene expression in Grey poplar
1.8	86.4	GSM327407	Populus balsamifera_1006_root_midday_1	GSE13990	Populus balsamifera developmental tissue series
1.6	84.5	GSM244438	Mmd infected tissue, biological rep3	GSE9673	Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
1.6	84.5	GSM334226	Populus balsamifera_1006_mature_leaf_midday_3	GSE13990	Populus balsamifera developmental tissue series

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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