Co-expression analysis

Gene ID PtpAffx.86209.1.S1_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At5g66490: unknown protein (HF=1e-7)
Module size 6 genes
NF 0.76
%ile 98.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9199.20.96PtpAffx.86209.1.S1_atCV272652hypothetical protein-1e-7At5g66490unknown proteinO.I.H.G.S.X.
0.9199.20.95PtpAffx.225309.1.S1_s_atpmrna44567hypothetical protein-2e-1At5g39580peroxidase, putativeO.I.H.G.S.X.
0.7393.60.93PtpAffx.224549.1.S1_s_atpmrna43182hypothetical protein-8e-3At1g05250peroxidase, putativeO.I.H.G.S.X.
0.7393.60.93PtpAffx.7936.2.A1_atCV244968--8e-6At3g06350MEE32 (MATERNAL EFFECT EMBRYO ARREST 32)O.I.H.G.S.X.
0.5784.20.93PtpAffx.68488.1.A1_atCV241159hypothetical protein-8e-2At2g43230serine/threonine protein kinase, putativeO.I.H.G.S.X.
0.4369.70.95Ptp.3277.1.S1_s_atDN498720hypothetical protein-1e-2At4g39830L-ascorbate oxidase, putativeO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
8.398.5GSM328483Populus x canescens root control_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
5.196.8GSM328566Populus x canescens root hypoxia_rep_08GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
4.796.3GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
4.696.2GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.794.7GSM327658Populus balsamifera_Female_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.694.5GSM328281Populus x canescens root control_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
3.694.5GSM327656Populus balsamifera_Female_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.594.3GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.594.3GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.293.5GSM328563Populus x canescens root hypoxia_rep_05GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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