Co-expression analysis

Gene ID PtpAffx.85797.1.S1_s_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At1g01540: protein kinase family protein (HF=3e-1)
Module size 6 genes
NF 0.14
%ile 26.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9199.20.93PtpAffx.85797.1.S1_s_atBU812872hypothetical protein-3e-1At1g01540protein kinase family proteinO.I.H.G.S.X.
0.4067.00.94Ptp.2927.2.S1_atDN499742tubulin gamma complex-associated protein /// tubulin gamma complex-associated protein-5e-47At5g06680SPC98 (SPINDLE POLE BODY COMPONENT 98)O.I.H.G.S.X.
0.1525.30.95Ptp.777.1.A1_atCV236864--7e+0At4g05530IBR1 (INDOLE-3-BUTYRIC ACID RESPONSE 1)O.I.H.G.S.X.
0.1321.60.94PtpAffx.109942.1.S1_s_atCN550009hypothetical protein-1e-4At1g01660U-box domain-containing proteinO.I.H.G.S.X.
0.1321.60.95Ptp.6370.3.S1_a_atCK091400hypothetical protein-6e+0At3g23635RTFL13 (ROTUNDIFOLIA LIKE 13)O.I.H.G.S.X.
0.035.20.94PtpAffx.212583.1.S1_atpmrna24652hypothetical protein-1e-10At5g24260prolyl oligopeptidase family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.995.1GSM328105Populus x canescens leaf hypoxia_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.791.8GSM328062Populus x canescens leaf control_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.490.4GSM328566Populus x canescens root hypoxia_rep_08GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.389.8GSM328562Populus x canescens root hypoxia_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.389.8GSM328558Populus x canescens root control_rep_09GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.289.3GSM328285Populus x canescens root control_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.289.3GSM328557Populus x canescens root control_rep_08GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.289.3GSM328066Populus x canescens leaf control_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.289.3GSM328565Populus x canescens root hypoxia_rep_07GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.188.6GSM328284Populus x canescens root control_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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