Co-expression analysis

Gene ID PtpAffx.83555.1.S1_s_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At1g14850: NUP155 (HF=3e-4)
Module size 9 genes
NF 0.62
%ile 91.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4067.00.96PtpAffx.83555.1.S1_s_atBI068935hypothetical protein-3e-4At1g14850NUP155O.I.H.G.S.X.
0.6791.10.96PtpAffx.3064.2.S1_atCX185938hypothetical protein-2e-9At5g66680DGL1O.I.H.G.S.X.
0.6791.10.97PtpAffx.100628.1.S1_s_atCF232037hypothetical protein-2e+0At2g38350unknown proteinO.I.H.G.S.X.
0.6791.10.97PtpAffx.10658.1.S1_atDN500790--6e-4At1g07705transcription regulatorO.I.H.G.S.X.
0.6388.10.97PtpAffx.94386.1.S1_atCN523156hypothetical protein-9e-46At1g73720transducin family protein / WD-40 repeat family proteinO.I.H.G.S.X.
0.6086.00.97PtpAffx.26440.3.S1_a_atCV237961hypothetical protein-1e-24At3g53500zinc knuckle (CCHC-type) family proteinO.I.H.G.S.X.
0.5984.90.97PtpAffx.225000.1.S1_atpmrna43976hypothetical protein-1e-86At5g45160root hair defective 3 GTP-binding (RHD3) family proteinO.I.H.G.S.X.
0.5884.20.97PtpAffx.150427.1.S1_atBU832236hypothetical protein-4e-37At1g43190polypyrimidine tract-binding protein, putative / heterogeneous nuclear ribonucleoprotein, putativeO.I.H.G.S.X.
0.5683.90.97Ptp.5539.3.S1_a_atCV273441hypothetical protein-9e-17At4g26430CSN6BO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
2.590.9GSM327411Populus balsamifera_1006_differentiating_xylem_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.188.6GSM327412Populus balsamifera_1006_differentiating_xylem_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.188.6GSM327413Populus balsamifera_1006_differentiating_xylem_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.088.0GSM334225Populus balsamifera_1006_mature_leaf_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.987.2GSM334226Populus balsamifera_1006_mature_leaf_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.987.2GSM334224Populus balsamifera_1006_mature_leaf_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.785.5GSM362889Clone1979_LPI5_N-_4w_rep1GSE14515Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979Link to GEO
1.684.5GSM372092Clone3200_LPI2_N-_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO
1.482.3GSM244441Mixed infected tissue, biological rep3GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungiLink to GEO
1.381.0GSM328062Populus x canescens leaf control_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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