Co-expression analysis

Gene ID PtpAffx.8017.1.S1_s_at
Gene name NAC domain protein, IPR003441
Homology with ArabidopsisSimilar to At1g67025: - (HF=1e+0)
Module size 6 genes
NF 0.45
%ile 74.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5582.20.84PtpAffx.8017.1.S1_s_atCF229161NAC domain protein, IPR003441-1e+0At1g67025-O.I.H.G.S.X.
0.6086.00.90PtpAffx.109937.1.A1_atCK097441NAC domain protein, IPR003441-4e-1At4g24700unknown proteinO.I.H.G.S.X.
0.6086.00.90PtpAffx.811.1.S1_atCK097682hypothetical protein-1e-9At3g01680unknown proteinO.I.H.G.S.X.
0.6086.00.90PtpAffx.811.1.S1_x_atCK097682hypothetical protein-1e-9At3g01680unknown proteinO.I.H.G.S.X.
0.5582.20.90PtpAffx.811.1.S1_s_atCK097682hypothetical protein-1e-9At3g01680unknown proteinO.I.H.G.S.X.
0.1423.50.85PtpAffx.213954.1.S1_atpmrna27198pho1-like protein-3e-13At2g03260EXS family protein / ERD1/XPR1/SYG1 family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.697.2GSM327408Populus balsamifera_1006_root_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
5.096.6GSM327407Populus balsamifera_1006_root_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.694.5GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.393.7GSM328105Populus x canescens leaf hypoxia_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
3.393.7GSM334224Populus balsamifera_1006_mature_leaf_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.892.1GSM328066Populus x canescens leaf control_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.791.8GSM328070Populus x canescens leaf control_rep_05GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.791.8GSM328062Populus x canescens leaf control_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.188.6GSM328284Populus x canescens root control_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
1.987.2GSM372096Clone3200_LPI5_N-_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO

Inter-species module comparison

A co-expression module including the rice gene, Os10g0427100, orthologous to the query gene, PtpAffx.8017.1.S1_s_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.7189.6Os10g0427100At1g67025-Conserved hypothetical protein3e-1At2g27740unknown proteinO.I.H.G.S.X.
0.5068.0Os07g0498300At1g67025--3e-14At4g20150unknown proteinO.I.H.G.S.X.
0.4051.1Os01g0111300At1g67025-Conserved hypothetical protein2e+0At5g10450GRF6 (G-box regulating factor 6)O.I.H.G.S.X.
0.3032.7Os04g0483800At1g67025--3e+0At5g12323unknown proteinO.I.H.G.S.X.
0.2219.4Os12g0147000At1g67025-Protein of unknown function DUF296 domaincontaining protein5e-1At4g00200DNA bindingO.I.H.G.S.X.
0.1712.6Os11g0308500At1g67025-Hypothetical protein1e+0At4g0081060S acidic ribosomal protein P1 (RPP1B)O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Triticum_aestivum
Vitis_vinifera
Zea_mays



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