Co-expression analysis

Gene ID PtpAffx.795.1.A1_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At5g59480: haloacid dehalogenase-like hydrolase family protein (HF=5e+0)
Module size 8 genes
NF 0.44
%ile 73.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7594.10.95PtpAffx.795.1.A1_atCV273354hypothetical protein-5e+0At5g59480haloacid dehalogenase-like hydrolase family proteinO.I.H.G.S.X.
0.5380.50.95PtpAffx.213719.1.S1_atpmrna26773hypothetical protein-2e-48At3g51630WNK5 (WITH NO LYSINE (K) KINASE 5)O.I.H.G.S.X.
0.5078.60.95Ptp.7695.1.S1_s_atBU862504hypothetical protein-2e-2At5g02020unknown proteinO.I.H.G.S.X.
0.5078.60.96PtpAffx.214531.1.S1_atpmrna28244hypothetical protein-1e-7At5g20550oxidoreductase, 2OG-Fe(II) oxygenase family proteinO.I.H.G.S.X.
0.4471.90.95PtpAffx.77546.1.S1_s_atBI127036hypothetical protein-3e-1At5g12310zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.4067.00.95PtpAffx.204632.1.S1_atpmrna9105hypothetical protein-1e-1At5g50200WR3 (WOUND-RESPONSIVE 3)O.I.H.G.S.X.
0.3964.60.95Ptp.6340.1.S1_atBU888207hypothetical protein-2e-2At5g59000zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.2543.60.95Ptp.3720.1.S1_atCX657369hypothetical protein-1e-1At1g55450embryo-abundant protein-relatedO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.694.5GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.490.4GSM328484Populus x canescens root hypoxia_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.289.3GSM328559Populus x canescens root control_rep_10GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.188.6GSM328284Populus x canescens root control_rep_03GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.188.6GSM328562Populus x canescens root hypoxia_rep_04GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.188.6GSM244438Mmd infected tissue, biological rep3GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungiLink to GEO
2.088.0GSM328277Populus x canescens root control_rep_01GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.088.0GSM244430non infected tissue, biological rep1GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungiLink to GEO
2.088.0GSM328532Populus x canescens root hypoxia_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.088.0GSM328564Populus x canescens root hypoxia_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage