Co-expression analysis

Gene ID PtpAffx.79084.1.S1_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At5g03880: electron carrier (HF=2e-18)
Module size 7 genes
NF 0.62
%ile 92.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5582.20.96PtpAffx.79084.1.S1_atBU889361hypothetical protein-2e-18At5g03880electron carrierO.I.H.G.S.X.
0.7192.60.96PtpAffx.126036.1.S1_atBP926823--8e-1At3g11020DREB2B (DRE/CRT-BINDING PROTEIN 2B)O.I.H.G.S.X.
0.6791.10.96PtpAffx.55477.1.S1_s_atCX186924hypothetical protein-3e-51At3g24430HCF101 (HIGH-CHLOROPHYLL-FLUORESCENCE 101)O.I.H.G.S.X.
0.6388.10.95PtpAffx.139489.1.S1_s_atBU880707hypothetical protein-1e+0At1g53620unknown proteinO.I.H.G.S.X.
0.6086.00.96PtpAffx.120315.1.S1_atCX171118hypothetical protein-5e-16At3g30200-O.I.H.G.S.X.
0.5078.60.96PtpAffx.381.3.A1_a_atBP928153--3e+0At2g26120glycine-rich proteinO.I.H.G.S.X.
0.4268.60.96PtpAffx.22483.1.S1_s_atDN499741hypothetical protein-4e-38At5g22800EMB1030 (EMBRYO DEFECTIVE 1030)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.092.9GSM244435Mlp infected tissue, biological rep3GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungiLink to GEO
2.892.1GSM244440Mixed infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungiLink to GEO
2.791.8GSM328565Populus x canescens root hypoxia_rep_07GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.691.3GSM244436Mmd infected tissue, biological rep1GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungiLink to GEO
2.691.3GSM244438Mmd infected tissue, biological rep3GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungiLink to GEO
2.691.3GSM244431non infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungiLink to GEO
2.590.9GSM244430non infected tissue, biological rep1GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungiLink to GEO
2.590.9GSM244437Mmd infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungiLink to GEO
2.490.4GSM244434Mlp infected tissue, biological rep2GSE9673Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungiLink to GEO
2.389.8GSM328564Populus x canescens root hypoxia_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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