Co-expression analysis

Gene ID PtpAffx.77318.1.S1_x_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At2g43570: chitinase, putative (HF=4e-2)
Module size 6 genes
NF 0.12
%ile 24.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5582.20.90PtpAffx.77318.1.S1_x_atCX658423hypothetical protein-4e-2At2g43570chitinase, putativeO.I.H.G.S.X.
0.6791.10.90PtpAffx.4462.1.S1_atCX185631hypothetical protein-3e-9At3g57260BGL2 (BETA-1,3-GLUCANASE 2)O.I.H.G.S.X.
0.5078.60.92PtpAffx.4462.1.S1_a_atCX185631hypothetical protein-3e-9At3g57260BGL2 (BETA-1,3-GLUCANASE 2)O.I.H.G.S.X.
0.5078.60.93PtpAffx.7639.1.A1_atBP935195hypothetical protein-3e+0At3g25130unknown proteinO.I.H.G.S.X.
0.069.80.89PtpAffx.14710.1.A1_a_atCV269309hypothetical protein-2e+0At3g62907unknown proteinO.I.H.G.S.X.
0.058.30.89PtpAffx.24353.1.A1_a_atCV274454hypothetical protein-3e-1At1g26250proline-rich extensin, putativeO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
8.198.5GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.894.9GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.092.9GSM372090Clone3200_LPI2_N+_4w_rep2GSE14893Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200Link to GEO
2.992.5GSM328281Populus x canescens root control_rep_02GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.389.8GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.389.8GSM328561Populus x canescens root control_rep_12GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
2.289.3GSM327405Populus balsamifera_1006_young_leaf_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.188.6GSM327658Populus balsamifera_Female_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.188.6GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.188.6GSM328483Populus x canescens root control_rep_06GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO

Inter-species module comparison

A co-expression module including the maize gene, Zm.201.1.S1_at, orthologous to the query gene, PtpAffx.77318.1.S1_x_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.9199.0Zm.201.1.S1_atAt2g43570class I acidic chitinase-8e-3At3g12500ATHCHIB (ARABIDOPSIS THALIANA BASIC CHITINASE)O.I.H.G.S.X.
0.6785.8Zm.3633.2.S1_x_atAt2g43570APx1 - Cytosolic Ascorbate Peroxidase-3e-28At1g07890APX1 (ascorbate peroxidase 1)O.I.H.G.S.X.
0.5674.4Zm.4623.1.S1_atAt2g43570Hypothetical protein LOC100217143-6e-2At1g68020ATTPS6O.I.H.G.S.X.
0.5267.3Zm.4002.1.A1_atAt2g43570hypothetical LOC542196-5e-28At2g1974060S ribosomal protein L31 (RPL31A)O.I.H.G.S.X.
0.5267.3Zm.9989.1.A1_atAt2g43570DNA binding protein-5e+0At5g03090unknown proteinO.I.H.G.S.X.
0.5166.4Zm.18244.1.S1_atAt2g43570--3e+0At1g24260SEP3 (SEPALLATA3)O.I.H.G.S.X.
0.5166.4Zm.16017.1.A1_atAt2g43570--2e-4At5g08415lipoic acid synthase family proteinO.I.H.G.S.X.
0.5065.7Zm.18516.1.A1_atAt2g43570--2e+0At5g55570unknown proteinO.I.H.G.S.X.
0.4961.9Zm.1773.1.S1_atAt2g43570hypothetical protein LOC100193052 /// hypothetical protein LOC100273661 /// hypothetical protein LOC100274588-6e-4At5g06370NC domain-containing proteinO.I.H.G.S.X.
0.4861.3Zm.14687.1.S1_s_atAt2g43570hypothetical protein LOC100272479-3e-1At2g15770glycine-rich proteinO.I.H.G.S.X.
0.4861.3Zm.16178.1.A1_s_atAt2g43570hypothetical protein LOC100275193 /// hypothetical protein LOC100276703-3e-5At4g39235unknown proteinO.I.H.G.S.X.
0.4658.4Zm.8233.1.A1_atAt2g43570--1e-2At4g31580SRZ-22O.I.H.G.S.X.
0.4556.4Zm.17650.1.A1_atAt2g43570prolyl 4-hydroxylase-6e-4At2g23096oxidoreductase, 2OG-Fe(II) oxygenase family proteinO.I.H.G.S.X.
0.4556.4Zm.1240.1.A1_atAt2g43570hypothetical protein LOC100274890-6e-3At3g29034unknown proteinO.I.H.G.S.X.
0.4455.7Zm.13409.1.S1_atAt2g435703-oxoacyl-synthase III-6e-2At1g62640KAS III (3-KETOACYL-ACYL CARRIER PROTEIN SYNTHASE III)O.I.H.G.S.X.
0.4352.8Zm.10872.1.A1_atAt2g43570--1e-8At1g59990DEAD/DEAH box helicase, putative (RH22)O.I.H.G.S.X.
0.4352.8Zm.12236.1.A1_atAt2g43570hypothetical protein LOC100194199-5e+0At3g13970APG12B (AUTOPHAGY 12 B)O.I.H.G.S.X.
0.4149.7Zm.11605.1.A1_atAt2g43570--4e+0At4g11930unknown proteinO.I.H.G.S.X.
0.4048.5Zm.5947.1.A1_atAt2g43570--3e+0At2g16490XH domain-containing proteinO.I.H.G.S.X.
0.4048.5Zm.6964.1.S1_atAt2g43570--6e-2At4g22320unknown proteinO.I.H.G.S.X.
0.3945.6Zm.5608.1.S1_a_atAt2g43570--8e+0At4g17650aromatic-rich family proteinO.I.H.G.S.X.
0.3945.6Zm.4385.1.S1_atAt2g43570small nuclear ribonucleoprotein-associated protein B-3e-15At5g44500small nuclear ribonucleoprotein associated protein B, putative / snRNP-B, putative / Sm protein B, putativeO.I.H.G.S.X.
0.3844.2Zm.4182.1.S1_atAt2g43570hypothetical protein LOC100276027-1e-4At5g54855pollen Ole e 1 allergen and extensin family proteinO.I.H.G.S.X.
0.3641.3Zm.18825.1.A1_atAt2g43570hypothetical protein LOC100194340-8e+0At3g17675copper ion binding / electron carrierO.I.H.G.S.X.
0.3641.3ZmAffx.216.1.S1_atAt2g43570--1e+1At5g44970-O.I.H.G.S.X.
0.3437.2Zm.2966.1.S1_atAt2g43570hypothetical protein LOC100273775-8e-1At1g01810unknown proteinO.I.H.G.S.X.
0.3437.2Zm.9542.1.A1_atAt2g43570hypothetical protein LOC100192045-3e-16At4g16170unknown proteinO.I.H.G.S.X.
0.3233.4Zm.9984.1.A1_atAt2g43570Hypothetical protein LOC100217031-4e-4At1g65000unknown proteinO.I.H.G.S.X.
0.3131.6Zm.16988.1.A1_atAt2g43570beta-7 tubulin-4e-117At5g23860TUB8O.I.H.G.S.X.
0.3029.8Zm.3699.5.A1_atAt2g43570--3e-2At5g09995unknown proteinO.I.H.G.S.X.
0.2928.1Zm.13595.1.A1_atAt2g43570phosphatase phospho1-2e-6At1g73010phosphataseO.I.H.G.S.X.
0.2928.1Zm.4764.1.S1_atAt2g43570vacuolar protein sorting 37C-2e-3At2g36680-O.I.H.G.S.X.
0.2828.1Zm.4965.1.A1_atAt2g43570cyclase/dehydrase family protein-2e-1At5g46790unknown proteinO.I.H.G.S.X.
0.2622.7Zm.2031.1.A1_atAt2g43570csu1120 protein-5e-4At3g50550unknown proteinO.I.H.G.S.X.
0.2521.3Zm.12992.1.A1_atAt2g43570--2e+0At3g17365catalytic/ methyltransferaseO.I.H.G.S.X.
0.2318.6Zm.14596.1.S1_atAt2g43570QM protein-6e-47At1g14320SAC52 (SUPPRESSOR OF ACAULIS 52)O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera



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