Co-expression analysis

Gene ID PtpAffx.75855.1.A1_at
Gene name hypothetical protein
Homology with ArabidopsisSimilar to At4g10540: subtilase family protein (HF=2e-3)
Module size 7 genes
NF 0.31
%ile 54.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6791.10.90PtpAffx.75855.1.A1_atCV255005hypothetical protein-2e-3At4g10540subtilase family proteinO.I.H.G.S.X.
0.4471.90.96PtpAffx.55786.1.S1_s_atCA825382hypothetical protein-5e-35At4g09510beta-fructofuranosidase, putative / invertase, putative / saccharase, putative / beta-fructosidase, putativeO.I.H.G.S.X.
0.3357.50.95PtpAffx.111048.1.S1_atBU883776hypothetical protein-2e-94At2g22480PFK5 (PHOSPHOFRUCTOKINASE 5)O.I.H.G.S.X.
0.2850.50.93Ptp.6779.1.S1_s_atCV258940hypothetical protein-5e-3At2g28430unknown proteinO.I.H.G.S.X.
0.2747.10.92PtpAffx.145980.1.S1_s_atCA823834hypothetical protein-3e-5At1g35580CINV1 (cytosolic invertase 1)O.I.H.G.S.X.
0.2136.50.94PtpAffx.207740.1.S1_atpmrna15383hypothetical protein-9e-92At3g11320organic anion transmembrane transporterO.I.H.G.S.X.
0.2034.60.94PtpAffx.5890.2.S1_atCF232083hypothetical protein-5e-3At5g17770ATCBR (ARABIDOPSIS THALIANA NADH:CYTOCHROME B5 REDUCTASE 1)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
8.498.6GSM136936Poplar in 1 x hrp + 0.25 % sucrose no bacteriaGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphereLink to GEO
5.196.8GSM327413Populus balsamifera_1006_differentiating_xylem_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
4.796.3GSM327412Populus balsamifera_1006_differentiating_xylem_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.293.5GSM327661Populus balsamifera_Male_Catkin_midday_3GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.193.2GSM327660Populus balsamifera_Male_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO
3.193.2GSM136938Poplar contacted with P. aeruginosa PAO1 in 1 x hrp + 0.25 % sucroseGSE5887Pseudomonas aeruginosa PAO1 virulent genes in the poplar rhizosphereLink to GEO
2.992.5GSM327411Populus balsamifera_1006_differentiating_xylem_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
2.490.4GSM327659Populus balsamifera_Male_Catkin_midday_1GSE13990Populus balsamifera developmental tissue seriesLink to GEO
1.987.2GSM328566Populus x canescens root hypoxia_rep_08GSE13109Effect of hypoxia on gene expression in Grey poplarLink to GEO
1.785.5GSM327657Populus balsamifera_Female_Catkin_midday_2GSE13990Populus balsamifera developmental tissue seriesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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