Co-expression analysis

Gene ID	PtpAffx.75141.1.S1_at
Gene name	glutathione peroxidase
Homology with Arabidopsis	Similar to At1g63460: glutathione peroxidase, putative (HF=5e-47)
Module size	6 genes
NF	0.57
%ile	87.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.63	88.1	0.96	PtpAffx.75141.1.S1_at	DN501057	glutathione peroxidase	-	5e-47	At1g63460	glutathione peroxidase, putative	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.67	91.1	0.96	PtpAffx.211466.1.S1_at	pmrna22473	hypothetical protein	-	1e-41	At3g60800	zinc finger (DHHC type) family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.67	91.1	0.97	PtpAffx.102758.1.S1_at	CK104528	hypothetical protein	-	2e-22	At3g21630	CERK1 (CHITIN ELICITOR RECEPTOR KINASE 1)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.55	82.2	0.97	PtpAffx.212790.1.S1_at	pmrna25029	hypothetical protein	-	3e-51	At2g04940	scramblase-related	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.46	73.7	0.96	Ptp.1319.1.A1_at	CF235627	iaa-amino acid hydrolase 4	-	4e-1	At1g06200	serine-type peptidase	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.27	47.1	0.96	Ptp.3057.1.A1_at	BP930786	hypothetical protein	-	5e-19	At5g19680	leucine-rich repeat family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
6.4	97.7	GSM327412	Populus balsamifera_1006_differentiating_xylem_midday_2	GSE13990	Populus balsamifera developmental tissue series
5.6	97.2	GSM327411	Populus balsamifera_1006_differentiating_xylem_midday_1	GSE13990	Populus balsamifera developmental tissue series
5.2	96.8	GSM327413	Populus balsamifera_1006_differentiating_xylem_midday_3	GSE13990	Populus balsamifera developmental tissue series
3.5	94.3	GSM327398	Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_3	GSE13990	Populus balsamifera developmental tissue series
2.4	90.4	GSM327397	Populus balsamifera_20071015_Etiolated_seedling_6d_transfered_to_light_3h_2	GSE13990	Populus balsamifera developmental tissue series
1.9	87.2	GSM328285	Populus x canescens root control_rep_04	GSE13109	Effect of hypoxia on gene expression in Grey poplar
1.7	85.5	GSM328534	Populus x canescens root control_rep_07	GSE13109	Effect of hypoxia on gene expression in Grey poplar
1.7	85.5	GSM328560	Populus x canescens root control_rep_11	GSE13109	Effect of hypoxia on gene expression in Grey poplar
1.7	85.5	GSM244431	non infected tissue, biological rep2	GSE9673	Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
1.6	84.5	GSM328561	Populus x canescens root control_rep_12	GSE13109	Effect of hypoxia on gene expression in Grey poplar

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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